C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162878-ENSG00000143924 CGP 9606 2:42048020-42332548
GeneTranscriptPositionBiotype
ENSG00000143924 (EML4)
echinoderm microtubule associated protein like 4 		ENST00000318522 (EML4-001) 42169350-42332548 protein_coding
ENST00000401738 (EML4-003) 42169461-42330874 protein_coding
ENST00000402711 (EML4-002) 42169353-42330744 protein_coding
ENST00000406175 (EML4-006) 42285923-42332548 retained_intron
ENST00000409040 (EML4-011) 42169381-42261513 retained_intron
ENST00000472632 (EML4-010) 42317474-42319998 processed_transcript
ENST00000480320 (EML4-005) 42282909-42289913 retained_intron
ENST00000482660 (EML4-009) 42169391-42245688 processed_transcript
ENSG00000162878 (PKDCC)
protein kinase domain containing, cytoplasmic 		ENST00000294964 (PKDCC-001) 42048020-42058528 protein_coding
ENST00000401498 (PKDCC-003) 42048044-42057742 nonsense_mediated_decay
ENST00000470578 (PKDCC-007) 42054942-42057913 retained_intron
ENST00000475241 (PKDCC-011) 42054807-42057406 retained_intron
ENST00000475868 (PKDCC-006) 42054642-42055631 retained_intron
ENST00000480099 (PKDCC-008) 42054957-42058186 processed_transcript
ENST00000485578 (PKDCC-005) 42048579-42053541 retained_intron
ENST00000490302 (PKDCC-004) 42054931-42058469 retained_intron
ENST00000492861 (PKDCC-002) 42048774-42054540 retained_intron

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00029H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024247-ENSMUSG00000032624 CGP 10090 17:83215292-83480361
GeneTranscriptPositionBiotype
ENSMUSG00000032624 (Eml4)
echinoderm microtubule associated protein like 4 		ENSMUST00000049503 (Eml4-201) 83350931-83480361 protein_coding
ENSMUST00000096766 (Eml4-202) 83350931-83480361 protein_coding
ENSMUST00000112363 (Eml4-203) 83350931-83480361 protein_coding
ENSMUSG00000094256 (Rpl21-ps7)
ribosomal protein L21, pseudogene 7 		ENSMUST00000077420 (Rpl21-ps7-201) 83288546-83289028 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029H_0001ENSG00000143924ENST00000318522ENST00000401738ENST00000402711ENST00000406175ENST00000409040ENST00000472632ENST00000480320ENST00000482660ENSG00000162878ENST00000294964ENST00000401498ENST00000470578ENST00000475241ENST00000475868ENST00000480099ENST00000485578ENST00000490302ENST00000492861CIL_00029H_0002ENSMUSG00000032624ENSMUST00000049503ENSMUST00000096766ENSMUST00000112363ENSMUSG00000094256ENSMUST00000077420
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029H_0001ENSG00000143924ENST00000318522ENST00000401738ENST00000402711ENST00000406175ENSG00000162878ENST00000294964ENST00000401498ENST00000470578ENST00000475241ENST00000475868ENST00000480099ENST00000490302ENST00000492861CIL_00029H_0002ENSMUSG00000032624ENSMUST00000049503ENSMUST00000096766ENSMUST00000112363ENSMUSG00000094256ENSMUST00000077420
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143924 ENST00000318522 6.808±0.00 8.767±0.00 0.802±0.00 1.303±0.00 5.845±0.60 4.375±2.49 1.595±0.00 6.243±0.20 4.784±0.00 10.530±0.00 0.441±0.24 12.236±5.81 10.326±2.24 3.845±0.10
ENST00000401738 N/A N/A N/A N/A 4.592±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402711 N/A N/A 3.614±0.00 1.146±0.19 3.027±0.00 2.567±0.00 0.585±0.00 N/A 3.447±0.00 3.326±0.00 N/A 25.967±0.00 14.365±0.00 22.027±0.00
ENST00000406175 N/A 4.290±0.00 1.284±0.00 0.612±0.16 N/A 2.450±0.00 N/A 0.804±0.00 0.700±0.00 3.765±1.92 N/A 9.149±6.82 2.843±1.89 5.712±0.00
ENST00000409040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162878 ENST00000294964 10.080±0.00 2.955±0.00 N/A N/A N/A 1.107±0.00 3.192±2.29 N/A 2.559±0.92 4.762±3.26 15.005±5.94 49.752±31.84 3.372±1.70 26.036±3.74
ENST00000401498 9.150±0.00 7.357±0.00 0.796±0.00 1.414±0.60 9.112±4.34 N/A 6.797±0.00 8.097±0.00 2.585±0.06 N/A 21.353±0.00 59.727±11.96 2.207±1.26 17.101±5.42
ENST00000470578 N/A N/A N/A N/A N/A 3.994±0.00 N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A
ENST00000475241 N/A N/A 1.059±0.00 N/A N/A 3.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475868 N/A N/A 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480099 6.778±0.00 7.947±0.00 N/A 1.055±0.00 6.314±4.15 N/A 3.619±0.00 5.304±0.00 2.694±0.00 5.292±2.52 13.415±0.00 35.107±0.00 2.168±0.46 12.520±0.00
ENST00000485578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490302 N/A 3.543±0.00 N/A N/A 3.161±1.93 N/A N/A 4.542±0.00 1.128±0.00 N/A N/A 19.060±0.00 N/A N/A
ENST00000492861 N/A N/A 1.341±0.00 N/A N/A N/A 1.051±0.00 N/A 4.257±0.00 N/A N/A 6.739±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032624 ENSMUST00000049503 6.860±3.85 4.910±0.33 2.862±1.38 6.735±3.67 6.753±1.68 7.523±1.29 1.308±0.36 2.619±0.67 1.888±0.77 5.426±0.69 0.264±0.25 9.260±2.81 5.942±0.92 4.667±0.84
ENSMUST00000096766 0.353±0.00 N/A 4.194±0.08 2.905±1.06 1.025±0.00 N/A 0.216±0.00 0.399±0.01 1.731±1.10 0.854±0.00 0.440±0.16 6.625±3.06 7.868±4.32 1.250±0.43
ENSMUST00000112363 N/A N/A N/A 6.137±3.94 0.960±0.00 N/A N/A N/A 0.531±0.00 1.194±0.00 0.110±0.02 N/A N/A 1.117±0.00
ENSMUSG00000094256 ENSMUST00000077420 N/A N/A 0.046±0.02 0.041±0.00 0.466±0.00 0.258±0.00 0.107±0.00 N/A 0.083±0.11 N/A 0.096±0.00 0.207±0.06 0.362±0.05 0.094±0.00

Loading