C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162878-ENSG00000143924 CGP 9606 2:42048020-42332548
GeneTranscriptPositionBiotype
ENSG00000143924 (EML4)
echinoderm microtubule associated protein like 4 		ENST00000318522 (EML4-001) 42169350-42332548 protein_coding
ENST00000401738 (EML4-003) 42169461-42330874 protein_coding
ENST00000402711 (EML4-002) 42169353-42330744 protein_coding
ENST00000406175 (EML4-006) 42285923-42332548 retained_intron
ENST00000409040 (EML4-011) 42169381-42261513 retained_intron
ENST00000472632 (EML4-010) 42317474-42319998 processed_transcript
ENST00000480320 (EML4-005) 42282909-42289913 retained_intron
ENST00000482660 (EML4-009) 42169391-42245688 processed_transcript
ENSG00000162878 (PKDCC)
protein kinase domain containing, cytoplasmic 		ENST00000294964 (PKDCC-001) 42048020-42058528 protein_coding
ENST00000401498 (PKDCC-003) 42048044-42057742 nonsense_mediated_decay
ENST00000470578 (PKDCC-007) 42054942-42057913 retained_intron
ENST00000475241 (PKDCC-011) 42054807-42057406 retained_intron
ENST00000475868 (PKDCC-006) 42054642-42055631 retained_intron
ENST00000480099 (PKDCC-008) 42054957-42058186 processed_transcript
ENST00000485578 (PKDCC-005) 42048579-42053541 retained_intron
ENST00000490302 (PKDCC-004) 42054931-42058469 retained_intron
ENST00000492861 (PKDCC-002) 42048774-42054540 retained_intron
CIL_00029H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024247-ENSMUSG00000032624 CGP 10090 17:83215292-83480361
GeneTranscriptPositionBiotype
ENSMUSG00000032624 (Eml4)
echinoderm microtubule associated protein like 4 		ENSMUST00000049503 (Eml4-201) 83350931-83480361 protein_coding
ENSMUST00000096766 (Eml4-202) 83350931-83480361 protein_coding
ENSMUST00000112363 (Eml4-203) 83350931-83480361 protein_coding
ENSMUSG00000094256 (Rpl21-ps7)
ribosomal protein L21, pseudogene 7 		ENSMUST00000077420 (Rpl21-ps7-201) 83288546-83289028 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029H_0001ENSG00000143924ENST00000318522ENST00000401738ENST00000402711ENST00000406175ENST00000409040ENST00000472632ENST00000480320ENST00000482660ENSG00000162878ENST00000294964ENST00000401498ENST00000470578ENST00000475241ENST00000475868ENST00000480099ENST00000485578ENST00000490302ENST00000492861CIL_00029H_0002ENSMUSG00000032624ENSMUST00000049503ENSMUST00000096766ENSMUST00000112363ENSMUSG00000094256ENSMUST00000077420
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029H_0001ENSG00000143924ENST00000318522ENST00000401738ENST00000402711ENST00000406175ENSG00000162878ENST00000294964ENST00000401498ENST00000470578ENST00000475241ENST00000475868ENST00000480099ENST00000490302ENST00000492861CIL_00029H_0002ENSMUSG00000032624ENSMUST00000049503ENSMUST00000096766ENSMUST00000112363ENSMUSG00000094256ENSMUST00000077420
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143924 ENST00000318522 6.808±0.00 8.767±0.00 0.802±0.00 1.303±0.00 5.845±0.60 4.375±2.49 1.595±0.00 6.243±0.20 4.784±0.00 10.530±0.00 0.441±0.24 12.236±5.81 10.326±2.24 3.845±0.10
ENST00000401738 N/A N/A N/A N/A 4.592±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402711 N/A N/A 3.614±0.00 1.146±0.19 3.027±0.00 2.567±0.00 0.585±0.00 N/A 3.447±0.00 3.326±0.00 N/A 25.967±0.00 14.365±0.00 22.027±0.00
ENST00000406175 N/A 4.290±0.00 1.284±0.00 0.612±0.16 N/A 2.450±0.00 N/A 0.804±0.00 0.700±0.00 3.765±1.92 N/A 9.149±6.82 2.843±1.89 5.712±0.00
ENST00000409040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162878 ENST00000294964 10.080±0.00 2.955±0.00 N/A N/A N/A 1.107±0.00 3.192±2.29 N/A 2.559±0.92 4.762±3.26 15.005±5.94 49.752±31.84 3.372±1.70 26.036±3.74
ENST00000401498 9.150±0.00 7.357±0.00 0.796±0.00 1.414±0.60 9.112±4.34 N/A 6.797±0.00 8.097±0.00 2.585±0.06 N/A 21.353±0.00 59.727±11.96 2.207±1.26 17.101±5.42
ENST00000470578 N/A N/A N/A N/A N/A 3.994±0.00 N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A
ENST00000475241 N/A N/A 1.059±0.00 N/A N/A 3.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475868 N/A N/A 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480099 6.778±0.00 7.947±0.00 N/A 1.055±0.00 6.314±4.15 N/A 3.619±0.00 5.304±0.00 2.694±0.00 5.292±2.52 13.415±0.00 35.107±0.00 2.168±0.46 12.520±0.00
ENST00000485578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490302 N/A 3.543±0.00 N/A N/A 3.161±1.93 N/A N/A 4.542±0.00 1.128±0.00 N/A N/A 19.060±0.00 N/A N/A
ENST00000492861 N/A N/A 1.341±0.00 N/A N/A N/A 1.051±0.00 N/A 4.257±0.00 N/A N/A 6.739±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032624 ENSMUST00000049503 6.860±3.85 4.910±0.33 2.862±1.38 6.735±3.67 6.753±1.68 7.523±1.29 1.308±0.36 2.619±0.67 1.888±0.77 5.426±0.69 0.264±0.25 9.260±2.81 5.942±0.92 4.667±0.84
ENSMUST00000096766 0.353±0.00 N/A 4.194±0.08 2.905±1.06 1.025±0.00 N/A 0.216±0.00 0.399±0.01 1.731±1.10 0.854±0.00 0.440±0.16 6.625±3.06 7.868±4.32 1.250±0.43
ENSMUST00000112363 N/A N/A N/A 6.137±3.94 0.960±0.00 N/A N/A N/A 0.531±0.00 1.194±0.00 0.110±0.02 N/A N/A 1.117±0.00
ENSMUSG00000094256 ENSMUST00000077420 N/A N/A 0.046±0.02 0.041±0.00 0.466±0.00 0.258±0.00 0.107±0.00 N/A 0.083±0.11 N/A 0.096±0.00 0.207±0.06 0.362±0.05 0.094±0.00

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