C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TP53RK binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144034 TPRKB 9606 - 2:73729104-73737400 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272424 TPRKB-001 73729830-73737386 protein_coding
  ENST00000318190 TPRKB-005 73729890-73737400 protein_coding
  ENST00000409716 TPRKB-004 73729890-73737400 protein_coding
  ENST00000462166 TPRKB-007 73730585-73737386 processed_transcript
  ENST00000463231 TPRKB-008 73729169-73737375 processed_transcript
  ENST00000470012 TPRKB-006 73731906-73737335 retained_intron
  ENST00000484969 TPRKB-009 73729234-73737358 processed_transcript
  ENST00000485758 TPRKB-011 73729890-73731149 processed_transcript
  ENST00000489476 TPRKB-010 73729104-73737335 processed_transcript
  ENST00000497464 TPRKB-002 73730264-73737340 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272424ENST00000318190ENST00000409716ENST00000462166ENST00000463231ENST00000470012ENST00000484969ENST00000485758ENST00000497464
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272424 4.301±0.00 7.660±0.00 0.971±0.00 2.460±0.00 3.466±2.33 3.262±1.66 4.653±3.00 4.508±2.26 2.786±1.18 1.885±0.00 0.650±0.00 13.134±6.10 5.863±0.14 15.218±0.00
ENST00000318190 2.064±0.00 6.348±0.00 0.900±0.00 1.126±0.20 3.849±0.00 1.544±0.35 N/A 1.097±0.00 2.005±0.00 2.900±0.00 2.050±0.00 5.934±0.66 2.513±0.00 5.073±0.72
ENST00000409716 N/A N/A N/A 1.576±0.06 0.319±0.00 N/A 2.476±1.23 4.701±0.00 N/A 1.458±0.00 2.984±0.06 7.561±4.28 3.545±0.74 N/A
ENST00000462166 3.331±0.00 7.368±0.00 N/A 2.641±0.00 4.800±0.00 5.178±0.00 N/A N/A N/A N/A N/A 7.158±0.00 4.294±0.00 14.308±0.00
ENST00000463231 N/A N/A N/A N/A N/A N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A N/A
ENST00000470012 N/A N/A N/A N/A N/A 2.012±0.00 N/A N/A 1.924±0.00 1.784±0.00 N/A 5.029±0.00 N/A 6.029±0.00
ENST00000484969 N/A N/A N/A 1.479±0.22 N/A 3.732±0.00 3.282±0.00 N/A 3.875±0.15 0.758±0.00 N/A 6.427±1.38 3.480±0.00 9.684±0.00
ENST00000485758 N/A N/A N/A N/A 0.624±0.00 1.801±0.00 N/A N/A 0.914±0.00 N/A N/A 1.953±0.00 N/A 3.590±0.00
ENST00000497464 N/A N/A N/A N/A N/A 1.149±0.00 N/A 2.172±0.00 N/A 1.378±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O2 CIL_0003O2_0001 CGP 2:73640832-73737400

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0008033 IEA tRNA processing
GO:0019901 IPI protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014941 tprkb Tp53rk binding protein protein_coding Danio_rerio
ENSMUSG00000054226 Tprkb Tp53rk binding protein protein_coding Mus_musculus

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