C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TP53RK binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272424 TPRKB-001 ENSG00000144034 9606 - 2:73729830-73737386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272424 4.301±0.00 7.660±0.00 0.971±0.00 2.460±0.00 3.466±2.33 3.262±1.66 4.653±3.00 4.508±2.26 2.786±1.18 1.885±0.00 0.650±0.00 13.134±6.10 5.863±0.14 15.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O2 CIL_0003O2_0001 CGP 2:73640832-73737400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0008033 IEA tRNA processing
GO:0019901 IPI protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067137 Tprkb-003 protein_coding Mus_musculus 0 580
ENSMUST00000113752 Tprkb-006 protein_coding Mus_musculus 0 580
ENSMUST00000113753 Tprkb-001 protein_coding Mus_musculus 0 580
ENSMUST00000089570 Tprkb-004 protein_coding Mus_musculus 0 468
ENSMUST00000149026 Tprkb-005 protein_coding Mus_musculus 0 453
ENSMUST00000113751 Tprkb-002 protein_coding Mus_musculus 0 344
ENSMUST00000150249 Tprkb-007 processed_transcript Mus_musculus 9.99995e-41 171

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