C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase modifying factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144455 SUMF1 9606 - 3:3700814-4467281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272902 SUMF1-001 4361146-4467281 protein_coding
  ENST00000383843 SUMF1-005 4361766-4467264 protein_coding
  ENST00000405420 SUMF1-002 4362109-4467273 protein_coding
  ENST00000448413 SUMF1-004 3781352-4467261 nonsense_mediated_decay
  ENST00000458465 SUMF1-003 4361795-4467269 protein_coding
  ENST00000469888 SUMF1-009 3782638-3799896 processed_transcript
  ENST00000470751 SUMF1-008 3700814-3800875 processed_transcript
  ENST00000484993 SUMF1-010 3795239-3798214 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272902ENST00000383843ENST00000405420ENST00000448413ENST00000458465ENST00000470751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272902 7.141±0.00 11.953±0.00 1.023±0.00 4.611±2.47 18.216±0.00 5.350±3.18 2.219±1.58 13.066±12.22 5.868±4.00 10.217±0.00 0.187±0.00 11.291±5.12 12.697±4.93 7.639±0.00
ENST00000383843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.927±0.00 N/A N/A N/A
ENST00000405420 N/A N/A N/A N/A 1.934±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448413 N/A N/A N/A N/A N/A N/A 0.234±0.00 N/A N/A 0.580±0.00 0.118±0.00 N/A N/A N/A
ENST00000458465 N/A N/A N/A N/A 2.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470751 N/A N/A N/A 0.789±0.00 0.872±0.00 N/A N/A 0.631±0.00 1.733±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0006665 TAS sphingolipid metabolic process
GO:0006687 TAS glycosphingolipid metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0042803 IEA protein homodimerization activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044203 sumf1 sulfatase modifying factor 1 protein_coding Danio_rerio
ENSMUSG00000030101 Sumf1 sulfatase modifying factor 1 protein_coding Mus_musculus

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