C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase modifying factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030101 Sumf1 10090 - 6:108107028-108185582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032191 Sumf1-001 108107028-108185582 protein_coding
  ENSMUST00000166197 Sumf1-005 108108347-108127063 processed_transcript
  ENSMUST00000167338 Sumf1-003 108108476-108185556 protein_coding
  ENSMUST00000169446 Sumf1-006 108118203-108144695 protein_coding
  ENSMUST00000171697 Sumf1-004 108144313-108152286 retained_intron
  ENSMUST00000172188 Sumf1-002 108108476-108185556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032191ENSMUST00000167338ENSMUST00000172188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032191 9.738±1.37 5.463±0.87 14.456±0.02 4.027±1.96 4.837±1.05 3.592±1.14 2.919±0.16 10.500±0.54 5.161±0.64 9.429±1.49 3.488±0.35 7.305±3.60 12.929±3.84 1.781±0.67
ENSMUST00000167338 11.578±3.44 13.028±1.58 N/A 1.067±0.03 6.860±2.68 6.944±1.37 3.168±0.75 9.542±5.13 3.737±2.31 9.877±2.55 N/A 10.984±3.74 N/A 2.097±0.30
ENSMUST00000172188 7.102±0.00 42.960±12.07 N/A N/A 11.080±1.36 8.762±3.08 N/A 6.381±0.00 N/A 10.649±4.56 N/A 9.907±3.66 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TR CIL_0004TR_0002 CGP 6:108107028-108551109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0016491 IEA oxidoreductase activity
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044203 sumf1 sulfatase modifying factor 1 protein_coding Danio_rerio
ENSG00000144455 SUMF1 sulfatase modifying factor 1 protein_coding Homo_sapiens

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