C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and MYND domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144504 ANKMY1 9606 - 2:240479422-240569209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272972 ANKMY1-001 240479422-240557974 protein_coding
  ENST00000361678 ANKMY1-002 240479422-240558021 protein_coding
  ENST00000373318 ANKMY1-012 240479422-240557962 protein_coding
  ENST00000391987 ANKMY1-201 240479422-240558021 protein_coding
  ENST00000391988 ANKMY1-023 240500544-240520527 protein_coding
  ENST00000401804 ANKMY1-010 240479609-240558002 protein_coding
  ENST00000403283 ANKMY1-005 240479427-240561110 protein_coding
  ENST00000405002 ANKMY1-006 240521938-240561091 protein_coding
  ENST00000405523 ANKMY1-009 240519755-240558021 protein_coding
  ENST00000406958 ANKMY1-011 240479422-240557963 protein_coding
  ENST00000407275 ANKMY1-024 240480993-240500104 protein_coding
  ENST00000411765 ANKMY1-017 240554979-240560826 protein_coding
  ENST00000418505 ANKMY1-022 240532076-240569209 protein_coding
  ENST00000418708 ANKMY1-021 240529041-240569177 protein_coding
  ENST00000441168 ANKMY1-016 240525685-240561091 protein_coding
  ENST00000443318 ANKMY1-019 240525804-240560776 protein_coding
  ENST00000459901 ANKMY1-014 240523258-240555560 retained_intron
  ENST00000462004 ANKMY1-020 240526237-240560769 processed_transcript
  ENST00000464991 ANKMY1-003 240552742-240561445 retained_intron
  ENST00000477316 ANKMY1-018 240553034-240557406 retained_intron
  ENST00000480230 ANKMY1-015 240521939-240527881 retained_intron
  ENST00000484526 ANKMY1-004 240521939-240561091 retained_intron
  ENST00000489677 ANKMY1-025 240500524-240507809 retained_intron
  ENST00000496300 ANKMY1-007 240523823-240560768 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLungMuscleOvaryTestisENST00000272972ENST00000405002ENST00000406958ENST00000443318ENST00000459901ENST00000464991ENST00000484526
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000272972 N/A N/A 2.754±0.00 N/A N/A N/A N/A N/A N/A 21.983±0.00
ENST00000405002 N/A N/A 0.393±0.00 N/A N/A N/A N/A N/A 0.828±0.00 N/A
ENST00000406958 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.337±0.00
ENST00000443318 N/A N/A N/A N/A N/A N/A N/A 3.758±0.00 N/A N/A
ENST00000459901 N/A N/A N/A 0.812±0.00 0.549±0.00 N/A 1.265±0.00 N/A N/A N/A
ENST00000464991 N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484526 6.250±0.00 N/A N/A N/A 0.943±0.00 0.277±0.00 3.251±0.00 N/A 3.554±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0001 VISTA 2:239957940-240560738
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0004UD CIL_0004UD_0002 CGP 2:240435671-240569209
CIL_0003MW CIL_0003MW_0001 CGP 2:240479422-240569209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062702 ankmy1 ankyrin repeat and MYND domain containing 1 protein_coding Danio_rerio
ENSMUSG00000034212 Ankmy1 ankyrin repeat and MYND domain containing 1 protein_coding Mus_musculus

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