C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019341-ENSDARG00000062702 CGP 7955 22:15652826-15715344
GeneTranscriptPositionBiotype
ENSDARG00000019341 (gpc1a)
glypican 1a 		ENSDART00000125450 (gpc1a-001) 15652826-15693809 protein_coding
ENSDARG00000062702 (ankmy1)
ankyrin repeat and MYND domain containing 1 		ENSDART00000090936 (ankmy1-201) 15697847-15715249 protein_coding
ENSDART00000132334 (ankmy1-002) 15711146-15715344 protein_coding
ENSDART00000141528 (ankmy1-001) 15697633-15708541 protein_coding
CIL_0004UD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000063660-ENSG00000144504 CGP 9606 2:240435671-240569209
GeneTranscriptPositionBiotype
ENSG00000063660 (GPC1)
glypican 1 		ENST00000264039 (GPC1-001) 240435671-240468078 protein_coding
ENST00000420138 (GPC1-002) 240452811-240466330 protein_coding
ENST00000425056 (GPC1-009) 240457965-240464939 protein_coding
ENST00000426280 (GPC1-007) 240454838-240462484 protein_coding
ENST00000427506 (GPC1-008) 240457434-240462568 protein_coding
ENST00000455111 (GPC1-010) 240463397-240466200 protein_coding
ENST00000466624 (GPC1-011) 240465527-240466793 processed_transcript
ENST00000469694 (GPC1-004) 240442327-240466358 retained_intron
ENST00000495100 (GPC1-003) 240458187-240466358 retained_intron
ENSG00000142327 (RNPEPL1)
arginyl aminopeptidase (aminopeptidase B)-like 1 		ENST00000270357 (RNPEPL1-001) 240568687-240581372 protein_coding
ENST00000437406 (RNPEPL1-004) 240575502-240578724 protein_coding
ENST00000451363 (RNPEPL1-005) 240565804-240576727 protein_coding
ENST00000460884 (RNPEPL1-008) 240574819-240575610 retained_intron
ENST00000464550 (RNPEPL1-007) 240574722-240577690 processed_transcript
ENST00000471657 (RNPEPL1-010) 240575298-240577642 retained_intron
ENST00000481757 (RNPEPL1-003) 240573870-240578724 retained_intron
ENST00000486058 (RNPEPL1-002) 240568861-240578727 retained_intron
ENST00000493398 (RNPEPL1-006) 240574554-240576966 retained_intron
ENST00000498042 (RNPEPL1-009) 240575074-240575776 retained_intron
ENSG00000144504 (ANKMY1)
ankyrin repeat and MYND domain containing 1 		ENST00000272972 (ANKMY1-001) 240479422-240557974 protein_coding
ENST00000361678 (ANKMY1-002) 240479422-240558021 protein_coding
ENST00000373318 (ANKMY1-012) 240479422-240557962 protein_coding
ENST00000391987 (ANKMY1-201) 240479422-240558021 protein_coding
ENST00000391988 (ANKMY1-023) 240500544-240520527 protein_coding
ENST00000401804 (ANKMY1-010) 240479609-240558002 protein_coding
ENST00000403283 (ANKMY1-005) 240479427-240561110 protein_coding
ENST00000405002 (ANKMY1-006) 240521938-240561091 protein_coding
ENST00000405523 (ANKMY1-009) 240519755-240558021 protein_coding
ENST00000406958 (ANKMY1-011) 240479422-240557963 protein_coding
ENST00000407275 (ANKMY1-024) 240480993-240500104 protein_coding
ENST00000411765 (ANKMY1-017) 240554979-240560826 protein_coding
ENST00000418505 (ANKMY1-022) 240532076-240569209 protein_coding
ENST00000418708 (ANKMY1-021) 240529041-240569177 protein_coding
ENST00000441168 (ANKMY1-016) 240525685-240561091 protein_coding
ENST00000443318 (ANKMY1-019) 240525804-240560776 protein_coding
ENST00000459901 (ANKMY1-014) 240523258-240555560 retained_intron
ENST00000462004 (ANKMY1-020) 240526237-240560769 processed_transcript
ENST00000464991 (ANKMY1-003) 240552742-240561445 retained_intron
ENST00000477316 (ANKMY1-018) 240553034-240557406 retained_intron
ENST00000480230 (ANKMY1-015) 240521939-240527881 retained_intron
ENST00000484526 (ANKMY1-004) 240521939-240561091 retained_intron
ENST00000489677 (ANKMY1-025) 240500524-240507809 retained_intron
ENST00000496300 (ANKMY1-007) 240523823-240560768 retained_intron
ENSG00000218416 (PP14571)
uncharacterized LOC100130449 		ENST00000404327 (PP14571-001) 240449418-240456714 antisense
ENST00000404891 (PP14571-002) 240449419-240456700 antisense
ENST00000471662 (PP14571-003) 240449315-240451543 retained_intron
ENST00000538012 (PP14571-004) 240450763-240452431 retained_intron
CIL_0004UD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034220-ENSMUSG00000034212 CGP 10090 1:92831645-92902906
GeneTranscriptPositionBiotype
ENSMUSG00000034212 (Ankmy1)
ankyrin repeat and MYND domain containing 1 		ENSMUST00000112998 (Ankmy1-002) 92870129-92902906 protein_coding
ENSMUST00000160548 (Ankmy1-001) 92870129-92902906 protein_coding
ENSMUSG00000034220 (Gpc1)
glypican 1 		ENSMUST00000045970 (Gpc1-001) 92831645-92860779 protein_coding
ENSMUST00000190215 (Gpc1-005) 92856768-92857595 retained_intron
ENSMUST00000190586 (Gpc1-003) 92853198-92855968 retained_intron
ENSMUST00000190677 (Gpc1-004) 92856562-92857522 retained_intron
ENSMUST00000191373 (Gpc1-002) 92831969-92835677 processed_transcript
ENSMUSG00000100781 (RP24-108K12.1)
predicted gene 29481 		ENSMUST00000189080 (RP24-108K12.1-001) 92820958-92837896 antisense
ENSMUSG00000101995 (RP24-108K12.3)
predicted gene 29480 		ENSMUST00000188589 (RP24-108K12.3-001) 92842177-92848771 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UD_0001ENSDARG00000019341ENSDART00000125450ENSDARG00000062702ENSDART00000090936ENSDART00000132334ENSDART00000141528CIL_0004UD_0002ENSG00000063660ENST00000264039ENST00000420138ENST00000425056ENST00000426280ENST00000427506ENST00000455111ENST00000466624ENST00000469694ENST00000495100ENSG00000142327ENST00000270357ENST00000437406ENST00000451363ENST00000460884ENST00000464550ENST00000471657ENST00000481757ENST00000486058ENST00000493398ENST00000498042ENSG00000144504ENST00000272972ENST00000361678ENST00000373318ENST00000391987ENST00000391988ENST00000401804ENST00000403283ENST00000405002ENST00000405523ENST00000406958ENST00000407275ENST00000411765ENST00000418505ENST00000418708ENST00000441168ENST00000443318ENST00000459901ENST00000462004ENST00000464991ENST00000477316ENST00000480230ENST00000484526ENST00000489677ENST00000496300ENSG00000218416ENST00000404327ENST00000404891ENST00000471662ENST00000538012CIL_0004UD_0003ENSMUSG00000034212ENSMUST00000112998ENSMUST00000160548ENSMUSG00000034220ENSMUST00000045970ENSMUST00000190215ENSMUST00000190586ENSMUST00000190677ENSMUST00000191373ENSMUSG00000100781ENSMUST00000189080ENSMUSG00000101995ENSMUST00000188589
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UD_0001ENSDARG00000019341ENSDART00000125450ENSDARG00000062702ENSDART00000090936ENSDART00000132334ENSDART00000141528CIL_0004UD_0002ENSG00000063660ENST00000264039ENST00000420138ENST00000425056ENST00000455111ENST00000466624ENST00000495100ENSG00000142327ENST00000270357ENST00000437406ENST00000464550ENST00000471657ENST00000486058ENST00000493398ENSG00000144504ENST00000272972ENST00000405002ENST00000406958ENST00000443318ENST00000459901ENST00000464991ENST00000484526ENSG00000218416ENST00000404327ENST00000404891ENST00000471662ENST00000538012CIL_0004UD_0003ENSMUSG00000034212ENSMUST00000112998ENSMUST00000160548ENSMUSG00000034220ENSMUST00000045970ENSMUST00000190586ENSMUSG00000100781ENSMUST00000189080ENSMUSG00000101995ENSMUST00000188589
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019341 ENSDART00000125450 N/A N/A N/A N/A N/A N/A 0.163±0.01 0.352±0.00 N/A N/A 0.386±0.00 N/A N/A N/A
ENSDARG00000062702 ENSDART00000090936 N/A N/A N/A N/A N/A N/A 0.049±0.00 0.542±0.00 N/A N/A 0.799±0.00 N/A N/A N/A
ENSDART00000132334 N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000141528 N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 0.022±0.00 N/A 1.091±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063660 ENST00000264039 18.305±0.00 9.621±0.00 0.450±0.00 16.671±15.04 18.404±16.86 7.866±6.89 29.166±27.46 15.961±12.29 12.329±10.63 5.487±5.12 23.649±17.80 37.357±32.16 31.902±4.64 27.273±13.32
ENST00000420138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.774±0.00 8.851±0.00
ENST00000425056 N/A N/A 2.017±0.00 N/A 1.994±0.00 1.038±0.00 N/A N/A N/A 1.064±0.00 N/A N/A N/A N/A
ENST00000426280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455111 N/A N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A N/A N/A N/A
ENST00000466624 N/A N/A 0.752±0.00 5.091±0.00 1.453±0.00 N/A N/A N/A 2.858±0.00 1.257±0.00 N/A 34.039±0.00 53.038±0.00 23.840±0.00
ENST00000469694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A 0.780±0.00 N/A N/A
ENSG00000142327 ENST00000270357 N/A N/A 0.265±0.00 N/A N/A 0.450±0.00 0.347±0.00 0.239±0.00 0.335±0.00 0.895±0.00 N/A N/A N/A N/A
ENST00000437406 22.527±0.00 29.322±0.00 N/A N/A 29.312±27.04 24.508±0.00 16.363±14.83 35.850±0.00 19.565±0.00 22.260±0.00 27.122±0.00 20.049±10.70 21.293±2.79 18.155±0.00
ENST00000451363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.303±0.00 N/A N/A
ENST00000471657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.139±0.00 49.789±0.00 28.990±0.00 N/A
ENST00000481757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486058 7.748±0.00 17.989±0.00 N/A 5.604±0.00 N/A 5.235±3.59 N/A 0.941±0.00 8.079±7.18 10.294±0.00 14.279±0.00 9.917±2.45 9.624±0.00 12.269±0.00
ENST00000493398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.911±0.00 16.431±0.00 N/A
ENST00000498042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144504 ENST00000272972 N/A N/A N/A 2.754±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.983±0.00
ENST00000361678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405002 N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A
ENST00000405523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.337±0.00
ENST00000407275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.758±0.00 N/A N/A N/A
ENST00000459901 N/A N/A N/A N/A 0.812±0.00 0.549±0.00 N/A N/A N/A 1.265±0.00 N/A N/A N/A N/A
ENST00000462004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464991 N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484526 N/A 6.250±0.00 N/A N/A N/A 0.943±0.00 N/A 0.277±0.00 N/A 3.251±0.00 N/A 3.554±0.00 N/A N/A
ENST00000489677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218416 ENST00000404327 N/A 0.020±0.00 N/A 0.513±0.00 0.021±0.00 0.137±0.00 0.059±0.04 N/A N/A 0.076±0.00 0.163±0.00 0.160±0.02 12.452±6.24 0.314±0.14
ENST00000404891 N/A N/A N/A 0.124±0.06 0.104±0.00 N/A N/A 0.096±0.00 0.129±0.00 N/A N/A 0.114±0.00 4.420±3.21 0.127±0.07
ENST00000471662 N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.165±0.00 N/A 0.095±0.00 2.884±0.31 0.185±0.00
ENST00000538012 N/A 0.018±0.00 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A 0.058±0.00 2.668±0.22 0.115±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034212 ENSMUST00000112998 0.014±0.01 0.052±0.04 0.054±0.00 0.060±0.00 0.034±0.04 0.039±0.03 0.039±0.04 0.028±0.01 0.010±0.00 N/A 0.008±0.00 0.255±0.11 0.098±0.07 3.600±0.00
ENSMUST00000160548 0.014±0.01 0.052±0.04 0.113±0.00 0.074±0.01 0.017±0.01 0.013±0.01 0.013±0.00 0.044±0.03 0.009±0.01 0.308±0.13 0.008±0.00 0.133±0.14 0.054±0.06 8.092±2.64
ENSMUSG00000034220 ENSMUST00000045970 14.713±9.07 18.960±1.25 2.579±0.99 37.176±15.55 7.203±3.18 6.561±1.87 78.204±31.64 3.186±1.27 0.900±0.49 7.825±2.91 45.267±21.62 32.537±14.17 25.080±9.04 3.062±0.43
ENSMUST00000190215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190586 N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A
ENSMUST00000190677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100781 ENSMUST00000189080 N/A N/A N/A 0.007±0.00 N/A N/A 0.032±0.00 N/A 0.006±0.00 N/A 0.071±0.05 0.099±0.07 0.037±0.00 N/A
ENSMUSG00000101995 ENSMUST00000188589 0.067±0.05 0.156±0.05 0.043±0.02 0.139±0.03 0.050±0.03 0.055±0.02 0.102±0.02 0.035±0.02 0.006±0.00 0.023±0.00 0.046±0.02 0.087±0.05 0.055±0.03 0.019±0.00

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