C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 6 interacting protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144746 ARL6IP5 9606 + 3:69084944-69106066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273258 ARL6IP5-001 69084944-69106066 protein_coding
  ENST00000470936 ARL6IP5-005 69085036-69102230 retained_intron
  ENST00000478935 ARL6IP5-002 69085021-69106064 protein_coding
  ENST00000484921 ARL6IP5-006 69085015-69104489 nonsense_mediated_decay
  ENST00000485444 ARL6IP5-004 69085042-69101894 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273258ENST00000470936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273258 38.964±0.00 53.881±0.00 3.384±0.00 48.009±24.88 24.049±8.66 37.045±27.42 30.021±19.37 24.597±18.55 13.572±3.06 36.689±22.26 29.812±24.18 21.189±11.33 56.565±13.82 10.131±2.61
ENST00000470936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.770±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034O CIL_00034O_0001 CGP 3:69054730-69106066
CIL_0003AZ CIL_0003AZ_0001 CGP 3:69084944-69123032

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0008022 IEA protein C-terminus binding
GO:0008631 IDA intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0010917 IMP negative regulation of mitochondrial membrane potential
GO:0015813 ISS L-glutamate transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032874 IMP positive regulation of stress-activated MAPK cascade
GO:0043065 IMP positive regulation of apoptotic process
GO:0043280 IMP positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0051051 IEA negative regulation of transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016238 arl6ip5b ADP-ribosylation factor-like 6 interacting protein 5b protein_coding Danio_rerio
ENSDARG00000077044 arl6ip5a ADP-ribosylation factor-like 6 interacting protein 5a protein_coding Danio_rerio
ENSMUSG00000035199 Arl6ip5 ADP-ribosylation factor-like 6 interacting protein 5 protein_coding Mus_musculus

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