C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00034O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144744-ENSG00000144746 CGP 9606 3:69054730-69106066
GeneTranscriptPositionBiotype
ENSG00000144744 (UBA3)
ubiquitin-like modifier activating enzyme 3 		ENST00000349511 (UBA3-002) 69054730-69080408 protein_coding
ENST00000361055 (UBA3-001) 69054730-69080408 protein_coding
ENST00000415609 (UBA3-006) 69054730-69080381 protein_coding
ENST00000461522 (UBA3-009) 69061583-69064091 retained_intron
ENST00000461934 (UBA3-007) 69055298-69080377 nonsense_mediated_decay
ENST00000464605 (UBA3-011) 69079744-69080354 retained_intron
ENST00000465108 (UBA3-003) 69071093-69080368 retained_intron
ENST00000465627 (UBA3-010) 69055298-69080377 nonsense_mediated_decay
ENST00000466763 (UBA3-004) 69075084-69080365 retained_intron
ENST00000485424 (UBA3-008) 69077339-69080363 retained_intron
ENST00000493957 (UBA3-005) 69075083-69080365 retained_intron
ENSG00000144746 (ARL6IP5)
ADP-ribosylation factor-like 6 interacting protein 5 		ENST00000273258 (ARL6IP5-001) 69084944-69106066 protein_coding
ENST00000470936 (ARL6IP5-005) 69085036-69102230 retained_intron
ENST00000478935 (ARL6IP5-002) 69085021-69106064 protein_coding
ENST00000484921 (ARL6IP5-006) 69085015-69104489 nonsense_mediated_decay
ENST00000485444 (ARL6IP5-004) 69085042-69101894 nonsense_mediated_decay
CIL_00034O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030061-ENSMUSG00000035199 CGP 10090 6:97183670-97233315
GeneTranscriptPositionBiotype
ENSMUSG00000030061 (Uba3)
ubiquitin-like modifier activating enzyme 3 		ENSMUST00000089287 (Uba3-201) 97183816-97205642 protein_coding
ENSMUST00000164744 (Uba3-202) 97183670-97205560 protein_coding
ENSMUSG00000035199 (Arl6ip5)
ADP-ribosylation factor-like 6 interacting protein 5 		ENSMUST00000044681 (Arl6ip5-001) 97210689-97233315 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034O_0001ENSG00000144744ENST00000349511ENST00000361055ENST00000415609ENST00000461522ENST00000461934ENST00000464605ENST00000465108ENST00000465627ENST00000466763ENST00000485424ENST00000493957ENSG00000144746ENST00000273258ENST00000470936ENST00000478935ENST00000484921ENST00000485444CIL_00034O_0002ENSMUSG00000030061ENSMUST00000089287ENSMUST00000164744ENSMUSG00000035199ENSMUST00000044681
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034O_0001ENSG00000144744ENST00000349511ENST00000361055ENSG00000144746ENST00000273258ENST00000470936CIL_00034O_0002ENSMUSG00000030061ENSMUST00000089287ENSMUST00000164744ENSMUSG00000035199ENSMUST00000044681
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144744 ENST00000349511 N/A N/A 4.157±0.00 7.621±0.00 8.775±0.00 8.261±0.00 4.267±0.00 N/A 6.202±0.00 N/A N/A 8.892±0.00 10.509±1.73 N/A
ENST00000361055 11.092±0.00 18.514±0.00 N/A 12.792±1.71 14.412±0.00 11.479±0.00 12.904±6.06 12.281±5.89 N/A 10.353±1.97 4.862±1.27 9.623±1.50 10.627±3.78 15.394±0.00
ENST00000415609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144746 ENST00000273258 38.964±0.00 53.881±0.00 3.384±0.00 48.009±24.88 24.049±8.66 37.045±27.42 30.021±19.37 24.597±18.55 13.572±3.06 36.689±22.26 29.812±24.18 21.189±11.33 56.565±13.82 10.131±2.61
ENST00000470936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.770±0.00 N/A N/A N/A
ENST00000478935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030061 ENSMUST00000089287 3.548±0.63 1.611±0.80 14.315±3.33 14.559±1.92 5.608±4.84 1.614±0.61 6.697±2.53 3.138±1.59 6.538±3.61 3.021±0.91 9.014±2.54 7.056±7.67 22.127±5.77 3.539±0.96
ENSMUST00000164744 11.735±4.18 4.299±0.71 4.196±0.00 7.857±5.59 7.186±1.23 3.893±1.50 8.157±1.27 6.398±0.95 2.738±1.08 8.022±1.20 N/A 6.553±1.62 3.553±0.00 2.933±0.88
ENSMUSG00000035199 ENSMUST00000044681 48.076±3.67 41.303±3.15 55.316±20.48 39.957±26.98 46.148±8.41 33.983±3.94 40.315±12.02 32.072±1.17 19.334±3.30 47.702±1.17 41.307±9.85 43.818±13.17 49.726±7.62 3.508±1.25

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