C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 30 (zinc transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145740 SLC30A5 9606 + 5:69093646-69131069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380860 SLC30A5-002 69093991-69104740 protein_coding
  ENST00000396591 SLC30A5-001 69093646-69131069 protein_coding
  ENST00000502979 SLC30A5-003 69094198-69104434 protein_coding
  ENST00000504103 SLC30A5-005 69094089-69104695 protein_coding
  ENST00000507354 SLC30A5-004 69102572-69123539 retained_intron
  ENST00000511158 SLC30A5-008 69123343-69130126 protein_coding
  ENST00000512367 SLC30A5-006 69118372-69121895 retained_intron
  ENST00000513937 SLC30A5-007 69117343-69123420 nonsense_mediated_decay
  ENST00000621204 SLC30A5-201 69093949-69131065 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380860ENST00000396591ENST00000507354ENST00000511158ENST00000513937ENST00000621204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380860 N/A N/A N/A N/A N/A N/A 3.091±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000396591 3.665±0.00 N/A N/A 2.581±0.00 6.267±0.00 2.882±0.39 0.929±0.18 4.427±3.12 2.474±0.00 4.211±0.00 0.992±0.24 3.683±1.61 6.246±0.00 4.837±0.00
ENST00000507354 N/A 1.941±0.00 N/A 0.974±0.00 N/A N/A N/A N/A N/A N/A 1.360±0.42 2.198±0.00 3.626±0.00 N/A
ENST00000511158 5.354±0.00 5.091±0.00 N/A 2.765±0.00 8.758±0.00 7.068±0.00 3.466±0.00 11.994±0.00 4.624±0.00 7.402±0.00 N/A N/A N/A 8.607±0.00
ENST00000513937 N/A N/A N/A N/A N/A N/A N/A 4.275±0.00 8.059±0.00 N/A 6.653±0.00 N/A N/A N/A
ENST00000621204 N/A 1.337±0.00 2.094±0.00 N/A 3.357±0.00 N/A 2.053±0.00 1.430±0.00 1.671±0.00 2.609±0.00 N/A 2.800±0.52 5.574±1.07 1.862±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0005887 TAS integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0006824 IDA cobalt ion transport
GO:0006829 IDA zinc ion transport
GO:0006882 IDA cellular zinc ion homeostasis
GO:0008270 NAS zinc ion binding
GO:0008324 IEA cation transmembrane transporter activity
GO:0010043 IDA response to zinc ion
GO:0010155 NAS regulation of proton transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0030141 IDA secretory granule
GO:0030667 TAS secretory granule membrane
GO:0044267 TAS cellular protein metabolic process
GO:0055085 TAS transmembrane transport
GO:0071577 IDA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051921 slc30a5 solute carrier family 30 (zinc transporter), member 5 protein_coding Danio_rerio
ENSMUSG00000021629 Slc30a5 solute carrier family 30 (zinc transporter), member 5 protein_coding Mus_musculus

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