C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396591 SLC30A5-001 ENSG00000145740 9606 + 5:69093646-69131069 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396591
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396591 3.665±0.00 2.581±0.00 6.267±0.00 2.882±0.39 0.929±0.18 4.427±3.12 2.474±0.00 4.211±0.00 0.992±0.24 3.683±1.61 6.246±0.00 4.837±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0005887 TAS integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0006824 IDA cobalt ion transport
GO:0006829 IDA zinc ion transport
GO:0006882 IDA cellular zinc ion homeostasis
GO:0008270 NAS zinc ion binding
GO:0008324 IEA cation transmembrane transporter activity
GO:0010043 IDA response to zinc ion
GO:0010155 NAS regulation of proton transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0030141 IDA secretory granule
GO:0030667 TAS secretory granule membrane
GO:0044267 TAS cellular protein metabolic process
GO:0055085 TAS:IEA transmembrane transport
GO:0071577 IDA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067246 Slc30a5-201 protein_coding Mus_musculus 0 3177

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