C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin-type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146007 ZMAT2 9606 + 5:140698680-140706676 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274712 ZMAT2-001 140700334-140706676 protein_coding
  ENST00000506644 ZMAT2-003 140700464-140705881 nonsense_mediated_decay
  ENST00000519913 ZMAT2-002 140698680-140704502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274712ENST00000506644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274712 45.131±0.00 60.922±0.00 7.823±0.00 38.020±15.83 29.915±23.56 27.112±19.76 7.395±5.27 25.622±17.11 14.244±8.67 23.424±14.69 12.847±3.91 31.809±21.53 40.076±8.30 33.915±8.16
ENST00000506644 N/A N/A N/A 43.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZR CIL_0006ZR_0001 CGP 5:140673173-140699291
CIL_0006ZQ CIL_0006ZQ_0001 CGP 5:140691426-140706676

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004956 zmat2 zinc finger, matrin type 2 protein_coding Danio_rerio
ENSMUSG00000001383 Zmat2 zinc finger, matrin type 2 protein_coding Mus_musculus

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