C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112855-ENSG00000146007 CGP 9606 5:140691426-140706676
GeneTranscriptPositionBiotype
ENSG00000112855 (HARS2)
histidyl-tRNA synthetase 2, mitochondrial 		ENST00000230771 (HARS2-001) 140691426-140699291 protein_coding
ENST00000448069 (HARS2-004) 140691614-140698938 protein_coding
ENST00000502303 (HARS2-005) 140691468-140695568 processed_transcript
ENST00000503873 (HARS2-008) 140691458-140694213 protein_coding
ENST00000506318 (HARS2-007) 140691563-140693987 retained_intron
ENST00000508522 (HARS2-003) 140691609-140698628 protein_coding
ENST00000509299 (HARS2-009) 140691453-140695634 protein_coding
ENST00000510104 (HARS2-002) 140691431-140696344 nonsense_mediated_decay
ENST00000511913 (HARS2-006) 140691455-140694291 retained_intron
ENST00000513688 (HARS2-011) 140693476-140696156 retained_intron
ENST00000513912 (HARS2-010) 140691514-140693803 retained_intron
ENST00000520095 (HARS2-012) 140691430-140695770 nonsense_mediated_decay
ENSG00000146007 (ZMAT2)
zinc finger, matrin-type 2 		ENST00000274712 (ZMAT2-001) 140700334-140706676 protein_coding
ENST00000506644 (ZMAT2-003) 140700464-140705881 nonsense_mediated_decay
ENST00000519913 (ZMAT2-002) 140698680-140704502 protein_coding
CIL_0006ZQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019143-ENSMUSG00000001383 CGP 10090 18:36783008-36799660
GeneTranscriptPositionBiotype
ENSMUSG00000001380 (Hars)
histidyl-tRNA synthetase 		ENSMUST00000001416 (Hars-201) 36766530-36783205 protein_coding
ENSMUSG00000001383 (Zmat2)
zinc finger, matrin type 2 		ENSMUST00000001419 (Zmat2-201) 36793923-36799660 protein_coding
ENSMUSG00000019143 (Hars2)
histidyl-tRNA synthetase 2, mitochondrial (putative) 		ENSMUST00000019287 (Hars2-002) 36783231-36791694 protein_coding
ENSMUST00000124204 (Hars2-007) 36790013-36791453 retained_intron
ENSMUST00000131952 (Hars2-005) 36787014-36788262 retained_intron
ENSMUST00000134122 (Hars2-003) 36783008-36790618 processed_transcript
ENSMUST00000145876 (Hars2-004) 36783269-36786458 retained_intron
ENSMUST00000152954 (Hars2-001) 36783008-36792562 protein_coding
ENSMUST00000155842 (Hars2-006) 36787820-36790159 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZQ_0001ENSG00000112855ENST00000230771ENST00000448069ENST00000502303ENST00000503873ENST00000506318ENST00000508522ENST00000509299ENST00000510104ENST00000511913ENST00000513688ENST00000513912ENST00000520095ENSG00000146007ENST00000274712ENST00000506644ENST00000519913CIL_0006ZQ_0002ENSMUSG00000001380ENSMUST00000001416ENSMUSG00000001383ENSMUST00000001419ENSMUSG00000019143ENSMUST00000019287ENSMUST00000124204ENSMUST00000131952ENSMUST00000134122ENSMUST00000145876ENSMUST00000152954ENSMUST00000155842
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZQ_0001ENSG00000112855ENST00000230771ENSG00000146007ENST00000274712ENST00000506644CIL_0006ZQ_0002ENSMUSG00000001380ENSMUST00000001416ENSMUSG00000001383ENSMUST00000001419ENSMUSG00000019143ENSMUST00000019287ENSMUST00000134122ENSMUST00000145876ENSMUST00000152954
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112855 ENST00000230771 N/A 21.714±0.00 4.261±0.00 N/A N/A 4.882±0.00 5.238±3.00 18.666±0.00 3.104±0.00 2.798±0.00 6.446±2.00 13.807±6.50 17.595±9.93 17.545±5.24
ENST00000448069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146007 ENST00000274712 45.131±0.00 60.922±0.00 7.823±0.00 38.020±15.83 29.915±23.56 27.112±19.76 7.395±5.27 25.622±17.11 14.244±8.67 23.424±14.69 12.847±3.91 31.809±21.53 40.076±8.30 33.915±8.16
ENST00000506644 N/A N/A N/A 43.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001380 ENSMUST00000001416 16.709±2.13 11.846±1.01 21.850±0.08 37.906±17.64 10.780±4.77 8.696±1.34 9.990±0.53 13.541±1.47 29.932±23.46 14.204±1.52 11.345±0.49 20.071±9.58 38.634±16.18 8.814±1.71
ENSMUSG00000001383 ENSMUST00000001419 11.343±1.75 9.583±2.42 14.872±4.60 29.919±13.82 12.281±3.75 7.386±1.53 7.334±0.28 11.896±1.17 12.514±8.79 11.073±1.64 13.063±4.81 14.852±6.99 22.930±11.01 11.641±3.49
ENSMUSG00000019143 ENSMUST00000019287 4.289±0.65 6.025±0.00 5.194±0.00 5.794±0.00 4.213±1.42 3.062±0.41 3.033±0.47 4.423±0.91 2.979±0.30 4.408±0.62 2.679±0.32 5.346±1.33 N/A 1.967±0.00
ENSMUST00000124204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134122 N/A 7.381±0.93 N/A N/A 8.872±1.52 8.396±2.87 N/A N/A N/A N/A N/A 10.451±3.53 N/A N/A
ENSMUST00000145876 N/A 30.171±3.37 N/A N/A N/A 10.327±0.48 N/A N/A 7.958±1.31 N/A N/A 19.328±5.08 N/A N/A
ENSMUST00000152954 3.979±0.98 3.193±0.43 7.074±0.45 6.990±0.18 2.591±0.39 2.849±0.38 2.568±0.57 4.234±0.63 4.583±0.89 3.750±0.32 2.818±0.51 5.298±2.21 7.544±1.89 1.699±0.33
ENSMUST00000155842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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