C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146232 NFKBIE 9606 - 6:44258166-44265788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275015 NFKBIE-001 44258166-44265788 protein_coding
  ENST00000443607 NFKBIE-003 44258693-44260144 protein_coding
  ENST00000477930 NFKBIE-002 44260474-44265593 nonsense_mediated_decay
  ENST00000616555 NFKBIE-201 44258694-44265788 protein_coding
  ENST00000619360 NFKBIE-004 44258166-44265534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275015ENST00000443607ENST00000477930ENST00000616555ENST00000619360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275015 N/A N/A 0.139±0.00 0.637±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443607 N/A 6.522±0.00 N/A 1.685±0.00 0.935±0.00 N/A 0.421±0.00 3.451±0.00 1.160±0.00 N/A N/A 30.214±26.37 13.924±0.00 15.554±13.08
ENST00000477930 N/A N/A N/A N/A N/A N/A 0.016±0.00 0.545±0.00 0.250±0.00 N/A N/A N/A N/A N/A
ENST00000616555 N/A N/A N/A 0.430±0.00 1.297±0.02 1.008±0.24 0.423±0.00 2.596±0.00 0.275±0.00 7.275±0.00 0.559±0.27 1.391±0.00 2.749±0.78 3.368±1.99
ENST00000619360 1.974±0.00 9.620±0.00 N/A 0.515±0.00 0.451±0.16 0.933±0.14 0.217±0.18 0.847±0.03 0.673±0.29 3.094±0.00 0.706±0.00 4.740±2.60 2.510±0.50 2.619±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0001 VISTA 6:44250447-44853640
CIL_00066L CIL_00066L_0002 CGP 6:44254096-44265788
CIL_000295 CIL_000295_0002 CGP 6:44258166-44307506

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0042942 IEA D-serine transport
GO:0042994 TAS cytoplasmic sequestering of transcription factor
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068367 nfkbie nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon protein_coding Danio_rerio
ENSMUSG00000023947 Nfkbie nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein_coding Mus_musculus

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