C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, rho 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146276 GABRR1 9606 - 6:89177501-89231278 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369451 GABRR1-003 89178599-89231278 protein_coding
  ENST00000435811 GABRR1-201 89177508-89217777 protein_coding
  ENST00000454853 GABRR1-001 89177501-89217433 protein_coding
  ENST00000457434 GABRR1-002 89178770-89217777 nonsense_mediated_decay
  ENST00000481493 GABRR1-004 89205471-89217261 processed_transcript
  ENST00000611484 GABRR1-202 89177508-89217777 protein_coding
  ENST00000621627 GABRR1-203 89177508-89221449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungMuscleOvaryPlacentaTestisENST00000369451ENST00000454853ENST00000457434ENST00000621627
Transcript ID Adrenal Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000369451 0.044±0.00 0.019±0.00 0.010±0.00 0.063±0.00 N/A 0.396±0.00 N/A N/A N/A
ENST00000454853 N/A N/A N/A N/A N/A N/A 0.019±0.00 0.359±0.00 0.639±0.00
ENST00000457434 N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.249±0.10
ENST00000621627 0.009±0.00 N/A 0.017±0.00 N/A N/A N/A N/A 0.012±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0007214 TAS gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0055085 TAS transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014057 gabrr2b gamma-aminobutyric acid (GABA) A receptor, rho 2b protein_coding Danio_rerio
ENSDARG00000052982 gabrr2a gamma-aminobutyric acid (GABA) A receptor, rho 2a protein_coding Danio_rerio
ENSMUSG00000028280 Gabrr1 gamma-aminobutyric acid (GABA) C receptor, subunit rho 1 protein_coding Mus_musculus

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