C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, rho 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457434 GABRR1-002 ENSG00000146276 9606 - 6:89178770-89217777 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungTestisENST00000457434
Transcript ID Lung Testis
ENST00000457434 0.105±0.00 0.249±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029947 Gabrr1-001 protein_coding Mus_musculus 0 1563
ENSMUST00000024035 Gabrr2-201 protein_coding Mus_musculus 0 883
ENSMUST00000108162 Gabrr2-001 protein_coding Mus_musculus 0 883
ENSDART00000011946 GABRR1 (1 of 2)-201 protein_coding Danio_rerio 0 850
ENSDART00000012376 gabrr1-001 protein_coding Danio_rerio 0 773
ENSMUST00000147889 Gabrr2-002 protein_coding Mus_musculus 0 560
ENSMUST00000131920 Gabrr2-003 protein_coding Mus_musculus 0 532
ENSDART00000048430 gabrr3a-001 protein_coding Danio_rerio 0 429
ENSDART00000152675 gabrr1-002 protein_coding Danio_rerio 0 309
ENSDART00000142566 gabrr3a-002 processed_transcript Danio_rerio 8e-27 126

Loading