C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor D and EGF domains
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146530 VWDE 9606 - 7:12330885-12403941 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275358 VWDE-001 12330885-12403905 protein_coding
  ENST00000326715 VWDE-002 12377564-12403724 nonsense_mediated_decay
  ENST00000452576 VWDE-005 12330918-12403941 nonsense_mediated_decay
  ENST00000485526 VWDE-003 12330887-12333726 retained_intron
  ENST00000521169 VWDE-004 12330918-12403941 nonsense_mediated_decay
  ENST00000614403 VWDE-201 12330918-12403941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000275358ENST00000326715ENST00000452576ENST00000485526ENST00000521169ENST00000614403
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000275358 N/A N/A 0.030±0.00 0.018±0.00 N/A N/A N/A 0.018±0.00 0.026±0.00 N/A N/A 0.096±0.00
ENST00000326715 N/A N/A N/A N/A N/A N/A 0.150±0.00 0.011±0.00 N/A N/A 0.024±0.00 0.086±0.00
ENST00000452576 0.005±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.020±0.01 0.007±0.00 0.057±0.00
ENST00000485526 N/A N/A 0.250±0.00 N/A N/A N/A N/A N/A N/A 0.067±0.00 0.099±0.09 0.218±0.11
ENST00000521169 0.009±0.00 0.049±0.00 0.057±0.00 0.081±0.01 0.008±0.00 0.066±0.00 0.052±0.02 N/A 0.008±0.00 0.017±0.00 0.004±0.00 N/A
ENST00000614403 0.009±0.00 0.054±0.00 0.054±0.00 0.067±0.00 0.008±0.00 0.010±0.00 0.053±0.02 N/A 0.008±0.00 0.014±0.00 0.005±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022S CIL_00022S_0001 CGP 7:12211241-12403941

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091322 VWDE von Willebrand factor D and EGF domains protein_coding Danio_rerio
ENSMUSG00000079679 Vwde von Willebrand factor D and EGF domains protein_coding Mus_musculus

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