C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106460-ENSG00000146530 CGP 9606 7:12211241-12403941
GeneTranscriptPositionBiotype
ENSG00000106460 (TMEM106B)
transmembrane protein 106B 		ENST00000396667 (TMEM106B-001) 12211300-12243367 protein_coding
ENST00000396668 (TMEM106B-002) 12211241-12233089 protein_coding
ENST00000420833 (TMEM106B-003) 12211270-12230939 nonsense_mediated_decay
ENST00000442107 (TMEM106B-006) 12211323-12214885 protein_coding
ENST00000444443 (TMEM106B-004) 12211296-12224274 protein_coding
ENST00000453686 (TMEM106B-005) 12211309-12215707 processed_transcript
ENST00000462754 (TMEM106B-008) 12230358-12232400 retained_intron
ENST00000492762 (TMEM106B-007) 12229748-12231529 retained_intron
ENSG00000146530 (VWDE)
von Willebrand factor D and EGF domains 		ENST00000275358 (VWDE-001) 12330885-12403905 protein_coding
ENST00000326715 (VWDE-002) 12377564-12403724 nonsense_mediated_decay
ENST00000452576 (VWDE-005) 12330918-12403941 nonsense_mediated_decay
ENST00000485526 (VWDE-003) 12330887-12333726 retained_intron
ENST00000521169 (VWDE-004) 12330918-12403941 nonsense_mediated_decay
ENST00000614403 (VWDE-201) 12330918-12403941 protein_coding
CIL_00022S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029571-ENSMUSG00000079679 CGP 10090 6:13069759-13224965
GeneTranscriptPositionBiotype
ENSMUSG00000029571 (Tmem106b)
transmembrane protein 106B 		ENSMUST00000031556 (Tmem106b-001) 13069839-13089269 protein_coding
ENSMUST00000122916 (Tmem106b-005) 13070251-13081652 protein_coding
ENSMUST00000124234 (Tmem106b-003) 13069759-13075094 protein_coding
ENSMUST00000136742 (Tmem106b-006) 13069851-13075385 retained_intron
ENSMUST00000142211 (Tmem106b-004) 13069816-13071953 protein_coding
ENSMUST00000142798 (Tmem106b-002) 13069854-13076370 processed_transcript
ENSMUSG00000079679 (Vwde)
von Willebrand factor D and EGF domains 		ENSMUST00000054530 (Vwde-201) 13185613-13224965 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022S_0001ENSG00000106460ENST00000396667ENST00000396668ENST00000420833ENST00000442107ENST00000444443ENST00000453686ENST00000462754ENST00000492762ENSG00000146530ENST00000275358ENST00000326715ENST00000452576ENST00000485526ENST00000521169ENST00000614403CIL_00022S_0002ENSMUSG00000029571ENSMUST00000031556ENSMUST00000122916ENSMUST00000124234ENSMUST00000136742ENSMUST00000142211ENSMUST00000142798ENSMUSG00000079679ENSMUST00000054530
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022S_0001ENSG00000106460ENST00000396667ENST00000396668ENST00000462754ENSG00000146530ENST00000275358ENST00000326715ENST00000452576ENST00000485526ENST00000521169ENST00000614403CIL_00022S_0002ENSMUSG00000029571ENSMUST00000031556ENSMUST00000124234ENSMUST00000136742ENSMUSG00000079679ENSMUST00000054530
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106460 ENST00000396667 N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A 0.421±0.00 N/A N/A 0.345±0.00 N/A N/A
ENST00000396668 3.816±0.00 1.804±0.00 3.324±0.00 7.287±0.00 3.562±0.82 5.273±1.88 3.036±0.00 4.819±0.00 4.390±0.71 4.611±2.24 2.380±0.00 4.164±0.86 3.754±1.24 3.513±1.86
ENST00000420833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462754 N/A N/A N/A N/A N/A N/A 7.288±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146530 ENST00000275358 N/A N/A N/A 0.030±0.00 0.018±0.00 N/A N/A N/A 0.018±0.00 0.026±0.00 N/A N/A N/A 0.096±0.00
ENST00000326715 N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 0.011±0.00 N/A N/A N/A 0.024±0.00 0.086±0.00
ENST00000452576 N/A 0.005±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.020±0.01 0.007±0.00 0.057±0.00
ENST00000485526 N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 0.099±0.09 0.218±0.11
ENST00000521169 N/A 0.009±0.00 0.049±0.00 0.057±0.00 0.081±0.01 0.008±0.00 0.066±0.00 0.052±0.02 N/A 0.008±0.00 N/A 0.017±0.00 0.004±0.00 N/A
ENST00000614403 N/A 0.009±0.00 0.054±0.00 0.054±0.00 0.067±0.00 0.008±0.00 0.010±0.00 0.053±0.02 N/A 0.008±0.00 N/A 0.014±0.00 0.005±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029571 ENSMUST00000031556 14.019±3.00 32.492±5.42 16.944±2.04 7.215±0.42 10.108±3.69 12.479±1.48 10.159±2.99 38.954±6.07 19.561±16.07 18.079±1.71 5.848±1.18 17.382±8.61 7.474±3.77 2.885±1.24
ENSMUST00000122916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124234 N/A N/A N/A 77.782±0.00 N/A N/A N/A N/A N/A N/A N/A 89.305±0.00 43.918±4.12 16.538±0.00
ENSMUST00000136742 N/A 52.853±21.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079679 ENSMUST00000054530 N/A 0.038±0.00 N/A 0.007±0.00 N/A N/A N/A N/A 0.003±0.00 N/A 0.005±0.00 0.057±0.02 0.013±0.00 N/A

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