C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106460-ENSG00000146530 CGP 9606 7:12211241-12403941
GeneTranscriptPositionBiotype
ENSG00000106460 (TMEM106B)
transmembrane protein 106B 		ENST00000396667 (TMEM106B-001) 12211300-12243367 protein_coding
ENST00000396668 (TMEM106B-002) 12211241-12233089 protein_coding
ENST00000420833 (TMEM106B-003) 12211270-12230939 nonsense_mediated_decay
ENST00000442107 (TMEM106B-006) 12211323-12214885 protein_coding
ENST00000444443 (TMEM106B-004) 12211296-12224274 protein_coding
ENST00000453686 (TMEM106B-005) 12211309-12215707 processed_transcript
ENST00000462754 (TMEM106B-008) 12230358-12232400 retained_intron
ENST00000492762 (TMEM106B-007) 12229748-12231529 retained_intron
ENSG00000146530 (VWDE)
von Willebrand factor D and EGF domains 		ENST00000275358 (VWDE-001) 12330885-12403905 protein_coding
ENST00000326715 (VWDE-002) 12377564-12403724 nonsense_mediated_decay
ENST00000452576 (VWDE-005) 12330918-12403941 nonsense_mediated_decay
ENST00000485526 (VWDE-003) 12330887-12333726 retained_intron
ENST00000521169 (VWDE-004) 12330918-12403941 nonsense_mediated_decay
ENST00000614403 (VWDE-201) 12330918-12403941 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00022S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029571-ENSMUSG00000079679 CGP 10090 6:13069759-13224965
GeneTranscriptPositionBiotype
ENSMUSG00000029571 (Tmem106b)
transmembrane protein 106B 		ENSMUST00000031556 (Tmem106b-001) 13069839-13089269 protein_coding
ENSMUST00000122916 (Tmem106b-005) 13070251-13081652 protein_coding
ENSMUST00000124234 (Tmem106b-003) 13069759-13075094 protein_coding
ENSMUST00000136742 (Tmem106b-006) 13069851-13075385 retained_intron
ENSMUST00000142211 (Tmem106b-004) 13069816-13071953 protein_coding
ENSMUST00000142798 (Tmem106b-002) 13069854-13076370 processed_transcript
ENSMUSG00000079679 (Vwde)
von Willebrand factor D and EGF domains 		ENSMUST00000054530 (Vwde-201) 13185613-13224965 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022S_0001ENSG00000106460ENST00000396667ENST00000396668ENST00000420833ENST00000442107ENST00000444443ENST00000453686ENST00000462754ENST00000492762ENSG00000146530ENST00000275358ENST00000326715ENST00000452576ENST00000485526ENST00000521169ENST00000614403CIL_00022S_0002ENSMUSG00000029571ENSMUST00000031556ENSMUST00000122916ENSMUST00000124234ENSMUST00000136742ENSMUST00000142211ENSMUST00000142798ENSMUSG00000079679ENSMUST00000054530
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022S_0001ENSG00000106460ENST00000396667ENST00000396668ENST00000462754ENSG00000146530ENST00000275358ENST00000326715ENST00000452576ENST00000485526ENST00000521169ENST00000614403CIL_00022S_0002ENSMUSG00000029571ENSMUST00000031556ENSMUST00000124234ENSMUST00000136742ENSMUSG00000079679ENSMUST00000054530
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106460 ENST00000396667 N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A 0.421±0.00 N/A N/A 0.345±0.00 N/A N/A
ENST00000396668 3.816±0.00 1.804±0.00 3.324±0.00 7.287±0.00 3.562±0.82 5.273±1.88 3.036±0.00 4.819±0.00 4.390±0.71 4.611±2.24 2.380±0.00 4.164±0.86 3.754±1.24 3.513±1.86
ENST00000420833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462754 N/A N/A N/A N/A N/A N/A 7.288±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146530 ENST00000275358 N/A N/A N/A 0.030±0.00 0.018±0.00 N/A N/A N/A 0.018±0.00 0.026±0.00 N/A N/A N/A 0.096±0.00
ENST00000326715 N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 0.011±0.00 N/A N/A N/A 0.024±0.00 0.086±0.00
ENST00000452576 N/A 0.005±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.020±0.01 0.007±0.00 0.057±0.00
ENST00000485526 N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 0.099±0.09 0.218±0.11
ENST00000521169 N/A 0.009±0.00 0.049±0.00 0.057±0.00 0.081±0.01 0.008±0.00 0.066±0.00 0.052±0.02 N/A 0.008±0.00 N/A 0.017±0.00 0.004±0.00 N/A
ENST00000614403 N/A 0.009±0.00 0.054±0.00 0.054±0.00 0.067±0.00 0.008±0.00 0.010±0.00 0.053±0.02 N/A 0.008±0.00 N/A 0.014±0.00 0.005±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029571 ENSMUST00000031556 14.019±3.00 32.492±5.42 16.944±2.04 7.215±0.42 10.108±3.69 12.479±1.48 10.159±2.99 38.954±6.07 19.561±16.07 18.079±1.71 5.848±1.18 17.382±8.61 7.474±3.77 2.885±1.24
ENSMUST00000122916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124234 N/A N/A N/A 77.782±0.00 N/A N/A N/A N/A N/A N/A N/A 89.305±0.00 43.918±4.12 16.538±0.00
ENSMUST00000136742 N/A 52.853±21.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079679 ENSMUST00000054530 N/A 0.038±0.00 N/A 0.007±0.00 N/A N/A N/A N/A 0.003±0.00 N/A 0.005±0.00 0.057±0.02 0.013±0.00 N/A

Loading