C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146574 CCZ1B 9606 - 7:6794134-6826770 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316731 CCZ1B-001 6798361-6826770 protein_coding
  ENST00000411858 CCZ1B-008 6813023-6826243 nonsense_mediated_decay
  ENST00000429267 CCZ1B-014 6794134-6796942 processed_transcript
  ENST00000462378 CCZ1B-009 6806004-6812510 retained_intron
  ENST00000464543 CCZ1B-002 6824038-6826216 retained_intron
  ENST00000467004 CCZ1B-003 6798941-6807178 retained_intron
  ENST00000468078 CCZ1B-010 6799195-6801595 retained_intron
  ENST00000472464 CCZ1B-011 6796836-6801503 processed_transcript
  ENST00000481830 CCZ1B-012 6796809-6801001 processed_transcript
  ENST00000485620 CCZ1B-007 6811541-6814828 retained_intron
  ENST00000486840 CCZ1B-004 6824388-6826272 retained_intron
  ENST00000490178 CCZ1B-006 6814644-6822429 retained_intron
  ENST00000496187 CCZ1B-005 6823856-6826205 retained_intron
  ENST00000597208 CCZ1B-013 6794141-6796936 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316731ENST00000411858ENST00000462378ENST00000464543ENST00000467004ENST00000468078ENST00000485620ENST00000486840ENST00000490178ENST00000496187
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316731 0.875±0.00 N/A 0.277±0.00 1.071±0.24 0.765±0.10 1.071±0.20 0.223±0.03 0.570±0.06 0.430±0.21 0.656±0.18 0.435±0.23 0.721±0.62 1.407±0.52 0.934±0.01
ENST00000411858 N/A 1.519±0.00 N/A 1.878±0.00 1.080±0.00 N/A 0.569±0.00 1.705±0.00 1.347±0.00 N/A N/A 2.527±0.00 0.930±0.00 3.642±0.00
ENST00000462378 N/A 1.703±0.00 2.165±0.00 N/A 3.976±0.00 2.205±0.00 N/A 0.993±0.00 N/A 1.006±0.00 N/A 3.995±0.00 N/A N/A
ENST00000464543 N/A N/A N/A N/A 0.653±0.00 N/A 0.312±0.00 N/A 0.468±0.00 N/A 0.954±0.00 N/A N/A N/A
ENST00000467004 N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 0.120±0.00 0.164±0.00 0.457±0.00 0.444±0.00 N/A N/A
ENST00000468078 N/A 2.780±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485620 N/A 2.084±0.00 N/A 1.608±0.00 N/A N/A 0.562±0.00 1.240±0.00 N/A N/A N/A 1.764±0.34 N/A N/A
ENST00000486840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A
ENST00000490178 N/A N/A 2.089±0.00 N/A N/A N/A N/A 0.763±0.00 N/A 2.822±0.00 0.513±0.00 N/A N/A N/A
ENST00000496187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.692±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VA CIL_0002VA_0001 CGP 7:6754109-6826770

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056559 ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000029617 Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated protein_coding Mus_musculus

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