C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM and PDZ domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147234 FRMPD3 9606 + X:107522450-107605251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276185 FRMPD3-201 107522450-107605244 protein_coding
  ENST00000439554 FRMPD3-001 107526646-107605251 protein_coding
  ENST00000477796 FRMPD3-002 107544583-107555197 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000276185ENST00000439554ENST00000477796
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000276185 N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A
ENST00000439554 0.011±0.00 N/A 0.008±0.00 0.718±0.31 0.007±0.00 0.028±0.00 0.009±0.00 0.083±0.07 N/A 0.722±0.54 0.045±0.03 0.241±0.03
ENST00000477796 N/A 0.066±0.00 N/A N/A N/A 0.070±0.00 0.032±0.00 N/A 0.024±0.00 0.203±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JC CIL_0006JC_0001 CGP X:107206632-107605251
CIL_0006JF CIL_0006JF_0001 CGP X:107522450-107651026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074865 FRMPD3 FERM and PDZ domain containing 3 protein_coding Danio_rerio
ENSMUSG00000042425 Frmpd3 FERM and PDZ domain containing 3 protein_coding Mus_musculus

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