C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080572-ENSG00000147234 CGP 9606 X:107206632-107605251
GeneTranscriptPositionBiotype
ENSG00000080572 (PIH1D3)
PIH1 domain containing 3 		ENST00000336387 (PIH1D3-002) 107207148-107243364 protein_coding
ENST00000372453 (PIH1D3-001) 107206632-107244243 protein_coding
ENST00000535523 (PIH1D3-201) 107206632-107244242 protein_coding
ENSG00000147234 (FRMPD3)
FERM and PDZ domain containing 3 		ENST00000276185 (FRMPD3-201) 107522450-107605244 protein_coding
ENST00000439554 (FRMPD3-001) 107526646-107605251 protein_coding
ENST00000477796 (FRMPD3-002) 107544583-107555197 processed_transcript
ENSG00000204053 (MYCLP1)
MYCL pseudogene 1 		ENST00000372451 (MYCLP1-001) 107272582-107273656 processed_pseudogene
ENSG00000214720 (KRT18P49)
keratin 18 pseudogene 49 		ENST00000427083 (KRT18P49-001) 107428630-107429461 processed_pseudogene
ENSG00000215007 (DNAJA1P3)
DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 3 		ENST00000399417 (DNAJA1P3-001) 107351650-107352843 processed_pseudogene
CIL_0006JC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042433-ENSMUSG00000042425 CGP 10090 X:140062879-140394540
GeneTranscriptPositionBiotype
ENSMUSG00000042425 (Frmpd3)
FERM and PDZ domain containing 3 		ENSMUST00000044702 (Frmpd3-002) 140381971-140394540 protein_coding
ENSMUST00000141660 (Frmpd3-001) 140367494-140393895 protein_coding
ENSMUSG00000042433 (E230019M04Rik)
RIKEN cDNA E230019M04 gene 		ENSMUST00000044806 (E230019M04Rik-001) 140062879-140106797 protein_coding
ENSMUSG00000081761 (Gm6298)
predicted gene 6298 		ENSMUST00000122262 (Gm6298-001) 140084480-140085460 processed_pseudogene
ENSMUSG00000086441 (Gm15046)
predicted gene 15046 		ENSMUST00000130153 (Gm15046-001) 140178698-140277862 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JC_0001ENSG00000080572ENST00000336387ENST00000372453ENST00000535523ENSG00000147234ENST00000276185ENST00000439554ENST00000477796ENSG00000204053ENST00000372451ENSG00000214720ENST00000427083ENSG00000215007ENST00000399417CIL_0006JC_0002ENSMUSG00000042425ENSMUST00000044702ENSMUST00000141660ENSMUSG00000042433ENSMUST00000044806ENSMUSG00000081761ENSMUST00000122262ENSMUSG00000086441ENSMUST00000130153
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JC_0001ENSG00000080572ENST00000336387ENST00000372453ENST00000535523ENSG00000147234ENST00000276185ENST00000439554ENST00000477796ENSG00000204053ENST00000372451ENSG00000214720ENST00000427083ENSG00000215007ENST00000399417CIL_0006JC_0002ENSMUSG00000042425ENSMUST00000044702ENSMUST00000141660ENSMUSG00000042433ENSMUST00000044806ENSMUSG00000081761ENSMUST00000122262ENSMUSG00000086441ENSMUST00000130153
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080572 ENST00000336387 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.285±0.00 N/A N/A N/A 5.740±2.43
ENST00000372453 0.051±0.00 0.102±0.00 N/A 0.085±0.00 0.020±0.00 0.023±0.00 0.026±0.00 0.046±0.00 0.041±0.00 0.422±0.24 0.005±0.00 0.413±0.38 N/A 1.141±0.34
ENST00000535523 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A
ENSG00000147234 ENST00000276185 N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A
ENST00000439554 0.011±0.00 N/A 0.008±0.00 0.718±0.31 N/A 0.007±0.00 0.028±0.00 N/A 0.009±0.00 0.083±0.07 N/A 0.722±0.54 0.045±0.03 0.241±0.03
ENST00000477796 N/A 0.066±0.00 N/A N/A N/A N/A 0.070±0.00 N/A 0.032±0.00 N/A 0.024±0.00 0.203±0.00 N/A N/A
ENSG00000204053 ENST00000372451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.44
ENSG00000214720 ENST00000427083 N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000215007 ENST00000399417 0.027±0.00 0.112±0.00 N/A 0.109±0.00 0.072±0.00 0.160±0.00 0.059±0.00 0.074±0.00 0.115±0.00 0.200±0.00 N/A 0.031±0.02 N/A 0.063±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042425 ENSMUST00000044702 N/A N/A N/A 0.099±0.00 N/A N/A N/A 0.019±0.00 N/A 0.027±0.01 N/A 0.006±0.00 0.002±0.00 0.028±0.02
ENSMUST00000141660 0.047±0.00 N/A 0.034±0.01 1.031±0.30 N/A N/A N/A 0.187±0.16 0.013±0.00 N/A N/A N/A 0.117±0.13 0.017±0.00
ENSMUSG00000042433 ENSMUST00000044806 N/A N/A 0.018±0.00 0.015±0.00 N/A N/A N/A N/A N/A 0.173±0.02 0.018±0.00 0.362±0.13 0.314±0.24 0.251±0.09
ENSMUSG00000081761 ENSMUST00000122262 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.020±0.02 N/A N/A 0.084±0.03 0.013±0.00 0.027±0.00
ENSMUSG00000086441 ENSMUST00000130153 N/A N/A N/A 0.160±0.13 N/A 0.149±0.00 N/A 0.125±0.00 N/A N/A N/A 0.436±0.27 N/A N/A

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