C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147364 FBXO25 9606 + 8:406428-477967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276326 FBXO25-003 413072-469873 protein_coding
  ENST00000350302 FBXO25-002 406808-469690 protein_coding
  ENST00000352684 FBXO25-201 406808-469871 protein_coding
  ENST00000382824 FBXO25-001 406955-477967 protein_coding
  ENST00000517464 FBXO25-006 458510-468180 retained_intron
  ENST00000518240 FBXO25-004 406428-435700 protein_coding
  ENST00000519274 FBXO25-008 468715-471225 nonsense_mediated_decay
  ENST00000519376 FBXO25-007 458369-468014 processed_transcript
  ENST00000524015 FBXO25-005 435448-451380 retained_intron
  ENST00000524125 FBXO25-009 420397-451320 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000350302ENST00000352684ENST00000382824ENST00000519376ENST00000524015
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000350302 2.254±0.00 4.529±0.00 1.460±0.00 2.738±0.19 5.206±0.00 3.752±0.00 2.801±1.96 3.626±0.93 3.364±1.83 2.177±0.02 2.410±1.59 2.595±1.56 5.164±1.11 16.853±4.92
ENST00000352684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.985±0.00 N/A
ENST00000382824 0.621±0.00 0.973±0.00 0.934±0.00 1.636±0.44 0.968±0.50 1.235±0.46 0.530±0.14 0.813±0.16 1.210±0.78 0.410±0.24 0.205±0.06 1.093±0.23 0.661±0.00 2.592±1.12
ENST00000519376 N/A N/A N/A N/A N/A N/A N/A N/A 6.789±0.00 N/A N/A 6.741±0.00 N/A 121.479±0.00
ENST00000524015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.155±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VU CIL_0007VU_0001 VISTA 8:396943-1005350
CIL_0000LO CIL_0000LO_0001 CGP 8:406428-545781

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0003779 IEA actin binding
GO:0004842 NAS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 ISS nucleus
GO:0016567 ISS protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075172 fbxo25 F-box protein 25 protein_coding Danio_rerio
ENSMUSG00000038365 Fbxo25 F-box protein 25 protein_coding Mus_musculus

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