C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007VU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm907 VISTA 9606 8:396943-1005350
GeneTranscriptPositionBiotype
ENSG00000104714 (ERICH1)
glutamate-rich 1 		ENST00000262109 (ERICH1-001) 664200-731239 protein_coding
ENST00000518277 (ERICH1-008) 673865-738106 processed_transcript
ENST00000518313 (ERICH1-010) 673844-686724 processed_transcript
ENST00000518895 (ERICH1-011) 671794-673462 processed_transcript
ENST00000519909 (ERICH1-005) 616526-640632 processed_transcript
ENST00000522706 (ERICH1-003) 614746-731197 protein_coding
ENST00000522893 (ERICH1-007) 665992-673657 protein_coding
ENST00000523053 (ERICH1-012) 664622-669277 retained_intron
ENST00000523415 (ERICH1-002) 614749-673326 nonsense_mediated_decay
ENST00000523709 (ERICH1-006) 637536-641207 processed_transcript
ENST00000524138 (ERICH1-009) 673767-715927 processed_transcript
ENSG00000180190 (TDRP)
testis development related protein 		ENST00000324079 (TDRP-001) 489803-544998 protein_coding
ENST00000427263 (TDRP-201) 489792-544845 protein_coding
ENST00000523656 (TDRP-002) 489803-545781 protein_coding
ENST00000524229 (TDRP-004) 492630-495010 processed_transcript
ENST00000613071 (TDRP-202) 489792-545781 protein_coding
ENSG00000254207 (RP11-43A14.1)
 ENST00000520760 (RP11-43A14.1-001) 725188-725877 sense_intronic
ENSG00000272293 (RP11-91J19.3)
 ENST00000607549 (RP11-91J19.3-001) 450714-451343 antisense
ENSG00000279852 (RP11-91J19.2)
 ENST00000623988 (RP11-91J19.2-001) 486117-488512 TEC
CIL_0007VU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm907 VISTA 10090 8:13771980-14374029
GeneTranscriptPositionBiotype
ENSMUSG00000031458 (Coprs)
coordinator of PRMT5, differentiation stimulator 		ENSMUST00000033839 (Coprs-201) 13884788-13890271 protein_coding
ENSMUSG00000038365 (Fbxo25)
F-box protein 25 		ENSMUST00000043520 (Fbxo25-201) 13907806-13940521 protein_coding
ENSMUSG00000038398 (Upf3a)
UPF3 regulator of nonsense transcripts homolog A (yeast) 		ENSMUST00000043767 (Upf3a-201) 13785615-13798538 protein_coding
ENSMUSG00000038416 (Cdc16)
CDC16 cell division cycle 16 		ENSMUST00000043962 (Cdc16-001) 13757676-13781938 protein_coding
ENSMUST00000129872 (Cdc16-005) 13758767-13763010 retained_intron
ENSMUST00000130173 (Cdc16-004) 13757715-13766495 processed_transcript
ENSMUST00000134645 (Cdc16-002) 13757677-13763007 processed_transcript
ENSMUST00000137360 (Cdc16-003) 13779002-13781938 retained_intron
ENSMUSG00000047495 (Dlgap2)
discs, large (Drosophila) homolog-associated protein 2 		ENSMUST00000043279 (Dlgap2-201) 14179667-14847108 protein_coding
ENSMUST00000129119 (Dlgap2-004) 14777773-14847398 processed_transcript
ENSMUST00000133298 (Dlgap2-001) 14095875-14847680 protein_coding
ENSMUST00000136000 (Dlgap2-007) 14381948-14531061 processed_transcript
ENSMUST00000137130 (Dlgap2-005) 14742753-14760902 processed_transcript
ENSMUST00000141155 (Dlgap2-006) 14381734-14507710 processed_transcript
ENSMUST00000141214 (Dlgap2-003) 14381996-14831758 retained_intron
ENSMUST00000150247 (Dlgap2-008) 14179667-14846708 protein_coding
ENSMUST00000152652 (Dlgap2-002) 14095865-14847108 protein_coding
ENSMUSG00000047710 (Champ1)
chromosome alignment maintaining phosphoprotein 1 		ENSMUST00000051870 (Champ1-001) 13869641-13881639 protein_coding
ENSMUST00000128557 (Champ1-002) 13869704-13879811 protein_coding
ENSMUSG00000050052 (Tdrp)
testis development related protein 		ENSMUST00000062613 (Tdrp-001) 13952009-13974777 protein_coding
ENSMUST00000119182 (Tdrp-002) 13972616-13974743 protein_coding
ENSMUST00000145695 (Tdrp-003) 13954113-13975032 protein_coding
ENSMUSG00000051978 (Erich1)
glutamate rich 1 		ENSMUST00000110813 (Erich1-201) 14027565-14090327 protein_coding
ENSMUSG00000057116 (AF366264)
cDNA sequence AF366264 		ENSMUST00000071308 (AF366264-201) 13835233-13838089 protein_coding
ENSMUSG00000065817 (Gm24698)
predicted gene, 24698 		ENSMUST00000083883 (Gm24698-201) 13876097-13876226 snoRNA
ENSMUSG00000068631 (Gm7676)
predicted gene 7676 		ENSMUST00000084055 (Gm7676-201) 13895816-13896613 protein_coding
ENSMUSG00000074461 (Gm10699)
predicted gene 10699 		ENSMUST00000098916 (Gm10699-201) 14090461-14092590 protein_coding
ENSMUSG00000085371 (Gm3160)
predicted pseudogene 3160 		ENSMUST00000128343 (Gm3160-001) 14136310-14136916 processed_pseudogene
ENSMUSG00000088311 (Gm26184)
predicted gene, 26184 		ENSMUST00000157686 (Gm26184-201) 14273181-14273311 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VU_0001ENSG00000104714ENST00000262109ENST00000518277ENST00000518313ENST00000518895ENST00000519909ENST00000522706ENST00000522893ENST00000523053ENST00000523415ENST00000523709ENST00000524138ENSG00000180190ENST00000324079ENST00000427263ENST00000523656ENST00000524229ENST00000613071ENSG00000254207ENST00000520760ENSG00000272293ENST00000607549ENSG00000279852ENST00000623988CIL_0007VU_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VU_0001ENSG00000104714ENST00000262109ENST00000518277ENST00000522706ENST00000522893ENST00000523053ENST00000524138ENSG00000180190ENST00000324079ENST00000427263ENST00000523656ENST00000524229ENST00000613071ENSG00000254207ENST00000520760ENSG00000272293ENST00000607549ENSG00000279852ENST00000623988CIL_0007VU_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104714 ENST00000262109 6.162±0.00 6.151±0.00 0.828±0.00 2.344±1.64 2.276±0.21 2.257±1.22 1.799±1.59 3.233±2.30 2.083±1.52 1.975±0.97 2.627±0.00 4.424±2.81 5.695±1.84 6.649±0.43
ENST00000518277 N/A N/A N/A 1.884±0.00 5.922±0.00 4.857±0.00 N/A N/A 3.992±0.00 5.244±0.00 1.450±0.00 6.845±2.72 14.981±0.00 N/A
ENST00000518313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522706 3.074±0.00 4.995±0.00 N/A 3.981±0.00 1.802±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.821±0.00
ENST00000522893 N/A 1.808±0.00 N/A N/A N/A N/A N/A N/A N/A 0.935±0.00 N/A 1.141±0.00 N/A N/A
ENST00000523053 N/A N/A N/A N/A N/A N/A N/A 2.083±0.00 N/A N/A N/A N/A N/A N/A
ENST00000523415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524138 N/A N/A N/A N/A N/A N/A N/A 0.998±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000180190 ENST00000324079 2.099±0.00 0.991±0.00 N/A 1.823±0.00 1.744±0.00 2.465±0.00 0.362±0.23 3.559±0.00 0.923±0.47 2.064±0.00 0.186±0.00 2.614±2.04 10.013±1.60 3.678±0.10
ENST00000427263 0.632±0.00 0.666±0.00 N/A N/A N/A N/A 0.049±0.00 1.413±0.04 0.640±0.00 N/A 0.135±0.00 N/A 14.437±0.00 1.759±0.00
ENST00000523656 N/A N/A N/A 0.856±0.00 0.386±0.00 N/A N/A N/A 0.571±0.00 2.565±0.00 N/A N/A N/A N/A
ENST00000524229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.917±0.00
ENST00000613071 N/A N/A 1.065±0.00 1.200±0.00 0.101±0.00 N/A N/A 0.943±0.00 0.534±0.00 0.950±0.00 N/A N/A 4.715±0.00 N/A
ENSG00000254207 ENST00000520760 N/A 0.080±0.00 N/A 0.091±0.00 N/A N/A 0.079±0.00 N/A N/A N/A N/A 0.109±0.00 0.213±0.11 N/A
ENSG00000272293 ENST00000607549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.420±0.00 N/A
ENSG00000279852 ENST00000623988 N/A 0.072±0.00 0.721±0.00 0.071±0.04 0.065±0.00 0.123±0.08 0.100±0.04 0.030±0.00 0.062±0.05 0.475±0.00 N/A 0.127±0.14 0.141±0.09 0.127±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031458 ENSMUST00000033839 6.547±0.46 19.485±3.46 6.472±1.01 21.137±3.89 4.446±0.98 10.834±2.98 8.050±1.19 14.427±1.83 2.694±0.73 4.949±0.29 4.690±0.31 9.674±3.70 7.988±4.04 35.265±7.20
ENSMUSG00000038365 ENSMUST00000043520 15.168±1.48 23.602±8.47 14.162±1.45 20.344±5.77 11.042±3.87 59.870±18.14 5.912±2.34 18.370±2.46 4.856±0.74 19.518±0.65 1.765±0.78 20.352±6.52 9.311±4.16 2.505±1.31
ENSMUSG00000038398 ENSMUST00000043767 6.031±1.10 3.310±0.29 9.327±2.03 16.223±7.35 4.111±1.83 2.808±1.55 2.085±0.87 4.094±1.54 5.634±3.86 5.774±0.59 4.392±1.31 9.969±9.85 14.276±4.40 160.503±166.03
ENSMUSG00000038416 ENSMUST00000043962 24.458±5.60 21.464±11.75 24.090±3.23 35.396±14.90 23.290±2.79 16.326±2.46 11.002±0.56 17.054±1.90 14.582±6.86 16.862±2.06 9.165±0.36 45.879±11.87 34.873±9.34 5.564±1.01
ENSMUST00000129872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137360 N/A N/A N/A 12.081±0.00 N/A N/A N/A N/A N/A N/A N/A 21.777±0.00 36.109±14.90 5.218±1.01
ENSMUSG00000047495 ENSMUST00000043279 N/A 0.094±0.02 N/A N/A N/A 0.060±0.02 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENSMUST00000129119 N/A 0.075±0.00 N/A N/A 0.015±0.00 0.032±0.02 N/A N/A 0.011±0.00 N/A 0.022±0.01 0.103±0.03 0.046±0.03 0.035±0.00
ENSMUST00000133298 0.104±0.00 0.032±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.006±0.00 N/A N/A 0.052±0.03 0.003±0.00 0.057±0.01
ENSMUST00000136000 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A
ENSMUST00000141155 N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A
ENSMUST00000141214 N/A 0.113±0.00 N/A 5.296±3.49 N/A 0.027±0.01 0.009±0.00 N/A 0.015±0.01 0.010±0.00 N/A 0.044±0.02 0.014±0.01 N/A
ENSMUST00000150247 0.047±0.00 0.125±0.01 N/A N/A N/A 0.071±0.00 N/A N/A 0.012±0.00 0.004±0.00 N/A 0.012±0.00 0.011±0.00 0.021±0.00
ENSMUST00000152652 N/A N/A N/A 6.337±0.00 N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.044±0.01
ENSMUSG00000047710 ENSMUST00000051870 4.306±1.70 8.171±1.30 6.487±0.23 11.440±2.25 3.799±0.93 3.841±0.65 1.638±0.18 4.674±0.57 3.801±2.40 4.607±0.44 1.627±0.14 7.280±1.35 5.415±1.91 3.197±0.23
ENSMUST00000128557 3.455±1.57 2.109±0.82 N/A 3.725±0.98 3.260±0.79 2.484±0.41 0.668±0.17 1.763±0.75 1.587±1.02 2.718±0.63 0.776±0.25 4.393±1.22 2.536±1.13 0.686±0.01
ENSMUSG00000050052 ENSMUST00000062613 18.106±9.63 14.276±2.85 13.750±4.08 2.499±0.84 13.679±7.73 1.398±0.17 1.413±0.10 14.675±1.42 2.298±2.29 2.939±1.68 2.472±0.83 11.470±3.86 43.596±34.97 15.789±7.93
ENSMUST00000119182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000051978 ENSMUST00000110813 2.127±0.14 1.950±0.18 3.522±0.67 4.584±2.03 1.912±0.18 2.688±0.52 1.445±0.10 1.308±0.54 1.614±0.88 3.327±0.13 0.966±0.21 3.143±2.65 7.803±5.24 4.474±2.33
ENSMUSG00000057116 ENSMUST00000071308 0.035±0.01 N/A 0.010±0.01 0.016±0.01 0.042±0.01 0.039±0.00 0.031±0.01 0.068±0.04 0.010±0.01 0.028±0.00 N/A 0.051±0.05 0.018±0.01 25.670±8.18
ENSMUSG00000065817 ENSMUST00000083883 N/A 674.849±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.096±0.00 18.726±0.00 N/A
ENSMUSG00000068631 ENSMUST00000084055 0.842±0.00 N/A 0.131±0.06 0.109±0.00 N/A 0.320±0.00 N/A 0.139±0.00 0.140±0.04 N/A N/A 0.503±0.00 0.069±0.06 5.183±2.57
ENSMUSG00000074461 ENSMUST00000098916 0.493±0.25 0.278±0.16 0.271±0.05 3.515±2.34 0.409±0.13 0.182±0.09 0.357±0.08 0.298±0.04 0.118±0.10 0.508±0.10 0.103±0.01 0.261±0.11 0.381±0.18 1.297±0.59
ENSMUSG00000085371 ENSMUST00000128343 N/A N/A N/A 0.275±0.24 0.296±0.00 N/A N/A N/A 0.012±0.00 N/A N/A 0.118±0.00 0.180±0.10 0.073±0.00
ENSMUSG00000088311 ENSMUST00000157686 N/A N/A N/A 48.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 9.183±0.00 N/A

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