C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147419 CCDC25 9606 - 8:27733311-27772653 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356537 CCDC25-001 27733311-27772634 protein_coding
  ENST00000517979 CCDC25-005 27748072-27772613 nonsense_mediated_decay
  ENST00000519299 CCDC25-011 27747753-27748548 retained_intron
  ENST00000519509 CCDC25-002 27735862-27772640 nonsense_mediated_decay
  ENST00000519843 CCDC25-010 27747877-27752589 retained_intron
  ENST00000520202 CCDC25-004 27735052-27772639 nonsense_mediated_decay
  ENST00000520486 CCDC25-006 27733318-27772653 nonsense_mediated_decay
  ENST00000521220 CCDC25-012 27736078-27748475 retained_intron
  ENST00000522915 CCDC25-009 27736052-27772634 protein_coding
  ENST00000523841 CCDC25-003 27735813-27772607 nonsense_mediated_decay
  ENST00000524084 CCDC25-013 27736163-27772627 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356537ENST00000517979ENST00000520202ENST00000520486ENST00000522915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356537 4.206±0.00 9.107±0.00 1.873±0.00 2.918±0.74 1.800±0.35 2.327±0.08 1.228±0.54 3.612±2.50 3.533±0.00 3.260±0.00 3.124±0.00 3.477±1.02 4.525±0.51 7.822±0.00
ENST00000517979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.373±0.00 12.914±0.00 14.649±0.00
ENST00000520202 6.019±0.00 6.497±0.00 1.176±0.00 5.568±0.00 5.416±0.00 3.227±0.00 1.406±0.54 4.324±0.00 2.592±0.91 2.200±0.00 3.514±0.00 1.599±0.12 2.174±0.55 5.318±0.66
ENST00000520486 N/A N/A N/A N/A 0.787±0.00 0.586±0.00 N/A N/A 1.074±0.00 N/A N/A 1.046±0.00 N/A 3.809±0.00
ENST00000522915 N/A N/A N/A 3.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0001 VISTA 8:27594923-28195834
CIL_0005SU CIL_0005SU_0002 CGP 8:27733311-27812640

Gene Ontology
GO IDEvidence TypeGO Description
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021753 ccdc25 coiled-coil domain containing 25 protein_coding Danio_rerio
ENSMUSG00000022035 Ccdc25 coiled-coil domain containing 25 protein_coding Mus_musculus

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