C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021753-ENSDARG00000014685 CGP 7955 20:39363409-39383863
GeneTranscriptPositionBiotype
ENSDARG00000014685 (esco2)
establishment of cohesion 1 homolog 2 		ENSDART00000009164 (esco2-001) 39369598-39383863 protein_coding
ENSDARG00000021753 (ccdc25)
coiled-coil domain containing 25 		ENSDART00000037282 (ccdc25-001) 39363409-39368825 protein_coding
ENSDART00000131601 (ccdc25-002) 39367369-39368832 retained_intron
ENSDART00000153396 (ccdc25-003) 39366129-39368839 retained_intron
CIL_0005SU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147419-ENSG00000171320 CGP 9606 8:27733311-27812640
GeneTranscriptPositionBiotype
ENSG00000147419 (CCDC25)
coiled-coil domain containing 25 		ENST00000356537 (CCDC25-001) 27733311-27772634 protein_coding
ENST00000517979 (CCDC25-005) 27748072-27772613 nonsense_mediated_decay
ENST00000519299 (CCDC25-011) 27747753-27748548 retained_intron
ENST00000519509 (CCDC25-002) 27735862-27772640 nonsense_mediated_decay
ENST00000519843 (CCDC25-010) 27747877-27752589 retained_intron
ENST00000520202 (CCDC25-004) 27735052-27772639 nonsense_mediated_decay
ENST00000520486 (CCDC25-006) 27733318-27772653 nonsense_mediated_decay
ENST00000521220 (CCDC25-012) 27736078-27748475 retained_intron
ENST00000522915 (CCDC25-009) 27736052-27772634 protein_coding
ENST00000523841 (CCDC25-003) 27735813-27772607 nonsense_mediated_decay
ENST00000524084 (CCDC25-013) 27736163-27772627 nonsense_mediated_decay
ENSG00000168078 (PBK)
PDZ binding kinase 		ENST00000301905 (PBK-001) 27809620-27838095 protein_coding
ENST00000521226 (PBK-005) 27820604-27837809 nonsense_mediated_decay
ENST00000522944 (PBK-002) 27810201-27838082 protein_coding
ENST00000524266 (PBK-006) 27810294-27837783 nonsense_mediated_decay
ENSG00000171320 (ESCO2)
establishment of sister chromatid cohesion N-acetyltransferase 2 		ENST00000305188 (ESCO2-001) 27774386-27805316 protein_coding
ENST00000397418 (ESCO2-201) 27774541-27808228 protein_coding
ENST00000518262 (ESCO2-006) 27780199-27799601 protein_coding
ENST00000519637 (ESCO2-005) 27774669-27776707 protein_coding
ENST00000522378 (ESCO2-002) 27774554-27812640 nonsense_mediated_decay
ENST00000523566 (ESCO2-004) 27771949-27776870 protein_coding
ENST00000523910 (ESCO2-007) 27776510-27780204 processed_transcript
ENST00000524293 (ESCO2-003) 27775497-27780095 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SU_0001ENSDARG00000014685ENSDART00000009164ENSDARG00000021753ENSDART00000037282ENSDART00000131601ENSDART00000153396CIL_0005SU_0002ENSG00000147419ENST00000356537ENST00000517979ENST00000519299ENST00000519509ENST00000519843ENST00000520202ENST00000520486ENST00000521220ENST00000522915ENST00000523841ENST00000524084ENSG00000168078ENST00000301905ENST00000521226ENST00000522944ENST00000524266ENSG00000171320ENST00000305188ENST00000397418ENST00000518262ENST00000519637ENST00000522378ENST00000523566ENST00000523910ENST00000524293
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SU_0001ENSDARG00000014685ENSDART00000009164ENSDARG00000021753ENSDART00000037282CIL_0005SU_0002ENSG00000147419ENST00000356537ENST00000517979ENST00000520202ENST00000520486ENST00000522915ENSG00000168078ENST00000301905ENST00000521226ENST00000522944ENST00000524266ENSG00000171320ENST00000305188ENST00000397418ENST00000518262ENST00000522378ENST00000523910ENST00000524293
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014685 ENSDART00000009164 N/A N/A N/A 0.881±0.42 N/A N/A 1.052±0.48 17.985±2.30 0.352±0.00 N/A 0.144±0.00 N/A N/A N/A
ENSDARG00000021753 ENSDART00000037282 N/A N/A N/A 24.860±11.93 N/A N/A 11.518±8.96 8.562±6.02 2.301±0.00 N/A 7.848±0.00 N/A N/A N/A
ENSDART00000131601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147419 ENST00000356537 4.206±0.00 9.107±0.00 1.873±0.00 2.918±0.74 1.800±0.35 2.327±0.08 1.228±0.54 3.612±2.50 3.533±0.00 3.260±0.00 3.124±0.00 3.477±1.02 4.525±0.51 7.822±0.00
ENST00000517979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.373±0.00 12.914±0.00 14.649±0.00
ENST00000519299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520202 6.019±0.00 6.497±0.00 1.176±0.00 5.568±0.00 5.416±0.00 3.227±0.00 1.406±0.54 4.324±0.00 2.592±0.91 2.200±0.00 3.514±0.00 1.599±0.12 2.174±0.55 5.318±0.66
ENST00000520486 N/A N/A N/A N/A 0.787±0.00 0.586±0.00 N/A N/A 1.074±0.00 N/A N/A 1.046±0.00 N/A 3.809±0.00
ENST00000521220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522915 N/A N/A N/A 3.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168078 ENST00000301905 0.025±0.00 N/A N/A 0.007±0.00 N/A 0.648±0.38 0.011±0.00 N/A 0.024±0.00 N/A N/A 1.681±1.19 1.451±0.98 14.883±8.07
ENST00000521226 N/A N/A N/A N/A 0.926±0.00 0.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522944 N/A N/A N/A N/A N/A 0.506±0.00 0.007±0.00 N/A N/A N/A N/A 1.963±0.00 1.062±0.00 6.954±0.00
ENST00000524266 N/A N/A N/A 0.034±0.00 N/A N/A 0.019±0.00 0.164±0.00 N/A 0.091±0.00 0.778±0.00 1.726±1.22 N/A 7.353±1.21
ENSG00000171320 ENST00000305188 N/A 0.023±0.00 N/A N/A N/A 0.285±0.00 0.053±0.00 N/A N/A 0.043±0.00 N/A 0.405±0.28 0.148±0.00 2.102±0.70
ENST00000397418 N/A N/A N/A N/A N/A 1.342±0.00 N/A N/A N/A 0.194±0.00 N/A 1.051±0.41 0.145±0.04 1.641±0.00
ENST00000518262 N/A N/A 0.450±0.00 0.535±0.00 0.620±0.44 4.021±0.00 N/A N/A 1.119±0.00 1.002±0.84 N/A N/A N/A N/A
ENST00000519637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522378 0.081±0.00 0.099±0.00 N/A 0.040±0.00 N/A N/A 0.035±0.01 0.112±0.06 N/A 0.075±0.00 0.004±0.00 0.073±0.00 N/A 1.575±0.00
ENST00000523566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523910 N/A N/A N/A N/A 0.654±0.00 N/A 0.084±0.00 N/A N/A 0.274±0.00 N/A 3.419±0.00 0.512±0.33 N/A
ENST00000524293 0.052±0.00 0.080±0.00 N/A 0.009±0.00 0.026±0.00 0.049±0.00 0.013±0.00 0.055±0.00 N/A 0.022±0.00 N/A 0.009±0.00 N/A N/A

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