C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147509 RGS20 9606 + 8:53851808-53959303 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276500 RGS20-003 53880894-53959274 protein_coding
  ENST00000297313 RGS20-001 53851808-53959303 protein_coding
  ENST00000344277 RGS20-006 53851900-53959303 protein_coding
  ENST00000517405 RGS20-011 53945325-53958697 processed_transcript
  ENST00000517659 RGS20-008 53851900-53959303 nonsense_mediated_decay
  ENST00000518286 RGS20-009 53879884-53954142 processed_transcript
  ENST00000522225 RGS20-007 53880872-53959296 protein_coding
  ENST00000523064 RGS20-005 53880901-53913922 processed_transcript
  ENST00000523280 RGS20-004 53851900-53959303 nonsense_mediated_decay
  ENST00000523414 RGS20-010 53880000-53954223 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000276500ENST00000297313ENST00000517405ENST00000517659ENST00000518286ENST00000522225ENST00000523064ENST00000523280ENST00000523414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000276500 N/A N/A N/A 2.215±1.58 0.063±0.00 N/A 0.002±0.00 0.012±0.00 N/A 0.023±0.02 0.463±0.00 N/A
ENST00000297313 N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517405 N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A 0.088±0.00 0.223±0.12 0.863±0.00 0.103±0.05
ENST00000517659 N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518286 N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A 0.063±0.00 0.247±0.04 N/A N/A
ENST00000522225 0.067±0.00 N/A N/A 0.712±0.00 N/A N/A 0.005±0.00 0.010±0.00 N/A 0.003±0.00 0.829±0.00 0.033±0.00
ENST00000523064 0.095±0.00 N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A 0.263±0.00 N/A 0.282±0.00
ENST00000523280 N/A N/A 0.074±0.00 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000523414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.244±0.00 0.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0001 VISTA 8:53576629-54178623

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0008277 TAS:IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038859 rgs20 regulator of G-protein signaling 20 protein_coding Danio_rerio
ENSMUSG00000002459 Rgs20 regulator of G-protein signaling 20 protein_coding Mus_musculus

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