C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002459 Rgs20 10090 - 1:4909576-5070285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002533 Rgs20-002 4909576-5019539 protein_coding
  ENSMUST00000118000 Rgs20-001 4909576-5070285 protein_coding
  ENSMUST00000119256 Rgs20-005 4910402-5018735 protein_coding
  ENSMUST00000133521 Rgs20-003 5062779-5070273 processed_transcript
  ENSMUST00000147158 Rgs20-004 4912342-5070282 protein_coding
  ENSMUST00000156289 Rgs20-006 4922528-5019379 retained_intron
  ENSMUST00000170566 Rgs20-007 4910474-5019379 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002533ENSMUST00000118000ENSMUST00000119256ENSMUST00000133521ENSMUST00000147158ENSMUST00000156289ENSMUST00000170566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002533 0.038±0.02 0.105±0.07 0.046±0.00 5.235±1.85 0.330±0.10 0.102±0.03 0.055±0.02 0.032±0.01 0.028±0.01 0.062±0.04 0.024±0.00 0.410±0.20 0.019±0.02 0.058±0.04
ENSMUST00000118000 N/A N/A N/A N/A 0.164±0.11 N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A 0.044±0.02
ENSMUST00000119256 N/A N/A N/A N/A 0.073±0.00 0.159±0.00 N/A N/A N/A 0.077±0.00 N/A 0.308±0.00 N/A 0.089±0.00
ENSMUST00000133521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00
ENSMUST00000147158 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.14 N/A 0.037±0.00
ENSMUST00000156289 0.039±0.00 N/A N/A N/A 0.081±0.04 N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A
ENSMUST00000170566 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 0.050±0.00 0.522±0.17 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053U CIL_00053U_0002 CGP 1:4909576-5162549

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005794 TAS Golgi apparatus
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038859 rgs20 regulator of G-protein signaling 20 protein_coding Danio_rerio
ENSG00000147509 RGS20 regulator of G-protein signaling 20 protein_coding Homo_sapiens

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