C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP23, small subunit (SSU) processome component, homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147679 UTP23 9606 + 8:116766503-116849463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309822 UTP23-001 116766503-116774690 protein_coding
  ENST00000517814 UTP23-004 116766508-116779586 protein_coding
  ENST00000517820 UTP23-008 116766572-116849463 protein_coding
  ENST00000519443 UTP23-003 116766556-116770849 retained_intron
  ENST00000520733 UTP23-009 116770190-116849079 protein_coding
  ENST00000521071 UTP23-006 116766509-116786798 nonsense_mediated_decay
  ENST00000521703 UTP23-007 116766505-116849286 nonsense_mediated_decay
  ENST00000521974 UTP23-005 116770098-116771783 retained_intron
  ENST00000524128 UTP23-010 116770190-116849079 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RQ CIL_0005RQ_0001 CGP 8:115408496-116766925
CIL_0005RV CIL_0005RV_0001 CGP 8:116642130-116849463
CIL_0004H8 CIL_0004H8_0001 CGP 8:116766503-116874866

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006364 IEA rRNA processing
GO:0032040 IEA small-subunit processome
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028249 utp23 UTP23, small subunit (SSU) processome component, homolog (yeast) protein_coding Danio_rerio
ENSMUSG00000022313 Utp23 UTP23, small subunit (SSU) processome component, homolog (yeast) protein_coding Mus_musculus

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