C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP23, small subunit (SSU) processome component, homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022313 Utp23 10090 + 15:51877429-51884614 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059599 Utp23-002 51877505-51882684 protein_coding
  ENSMUST00000136129 Utp23-003 51877742-51882683 protein_coding
  ENSMUST00000137116 Utp23-001 51877429-51884614 protein_coding
  ENSMUST00000161651 Utp23-004 51877478-51882689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059599ENSMUST00000136129ENSMUST00000137116ENSMUST00000161651
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059599 N/A 1.262±0.54 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.347±1.15 7.338±1.91 3.298±0.00
ENSMUST00000136129 N/A N/A 1.511±0.00 1.051±0.00 N/A N/A N/A N/A 1.992±0.65 N/A 1.077±0.39 1.657±0.64 4.720±2.35 N/A
ENSMUST00000137116 1.938±0.53 1.159±0.12 2.336±0.22 2.032±1.13 1.771±0.56 2.005±0.12 1.297±0.08 1.470±0.13 1.757±0.82 2.726±0.02 0.752±0.12 1.642±0.51 2.000±1.03 1.576±0.81
ENSMUST00000161651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.883±0.23 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RV CIL_0005RV_0002 CGP 15:51786558-51884614
CIL_0004H8 CIL_0004H8_0002 CGP 15:51877429-51991760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0032040 IEA small-subunit processome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028249 utp23 UTP23, small subunit (SSU) processome component, homolog (yeast) protein_coding Danio_rerio
ENSG00000147679 UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) protein_coding Homo_sapiens

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