C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stomatin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148175 STOM 9606 - 9:121338988-121370304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000286713 STOM-001 121339077-121370205 protein_coding
  ENST00000347359 STOM-002 121340770-121370253 protein_coding
  ENST00000538954 STOM-201 121338988-121370304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286713ENST00000347359ENST00000538954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286713 142.199±0.00 74.309±0.00 11.658±0.00 22.978±16.86 52.961±34.99 61.182±53.54 29.605±18.11 35.340±1.88 72.262±51.62 126.524±101.22 22.352±17.10 23.152±13.28 81.378±22.78 21.850±15.47
ENST00000347359 N/A N/A N/A 24.196±18.20 11.149±0.00 6.832±0.00 7.515±0.00 N/A 18.833±0.00 19.659±0.00 7.231±0.00 9.130±0.88 N/A 6.871±0.00
ENST00000538954 N/A 68.496±0.00 N/A 5.665±0.00 N/A N/A 5.740±0.00 18.268±0.00 10.890±0.00 13.409±0.00 5.023±0.00 13.285±9.65 40.684±0.00 6.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N3 CIL_0006N3_0001 CGP 9:121207794-121370304

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005887 IEA:IDA integral component of plasma membrane
GO:0016020 IDA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0031982 IDA vesicle
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0045121 IDA membrane raft
GO:0051260 IDA protein homooligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle
GO:1901585 IEA regulation of acid-sensing ion channel activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003835 stom stomatin protein_coding Danio_rerio
ENSMUSG00000026880 Stom stomatin protein_coding Mus_musculus

Loading