C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stomatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286713 STOM-001 ENSG00000148175 9606 - 9:121339077-121370205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286713 142.199±0.00 74.309±0.00 11.658±0.00 22.978±16.86 52.961±34.99 61.182±53.54 29.605±18.11 35.340±1.88 72.262±51.62 126.524±101.22 22.352±17.10 23.152±13.28 81.378±22.78 21.850±15.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N3 CIL_0006N3_0001 CGP 9:121207794-121370304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005887 IEA:IDA integral component of plasma membrane
GO:0016020 IDA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0031982 IDA vesicle
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0045121 IDA membrane raft
GO:0051260 IDA protein homooligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle
GO:1901585 IEA regulation of acid-sensing ion channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028241 Stom-001 protein_coding Mus_musculus 0 867

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