C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 13, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148541 FAM13C 9606 - 10:59246129-59363181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000422313 FAM13C-007 59253717-59362460 protein_coding
  ENST00000435852 FAM13C-004 59251169-59362508 protein_coding
  ENST00000468696 FAM13C-012 59263882-59270035 protein_coding
  ENST00000468840 FAM13C-006 59247567-59362903 protein_coding
  ENST00000470220 FAM13C-014 59301152-59362701 processed_transcript
  ENST00000477101 FAM13C-015 59269947-59297258 processed_transcript
  ENST00000489341 FAM13C-013 59247692-59302856 nonsense_mediated_decay
  ENST00000503444 FAM13C-008 59352329-59362830 protein_coding
  ENST00000507568 FAM13C-019 59268592-59270321 retained_intron
  ENST00000507862 FAM13C-016 59323230-59352353 processed_transcript
  ENST00000510215 FAM13C-017 59300706-59324106 processed_transcript
  ENST00000512919 FAM13C-009 59352270-59363181 protein_coding
  ENST00000513377 FAM13C-018 59268656-59283681 retained_intron
  ENST00000611933 FAM13C-002 59246179-59362594 protein_coding
  ENST00000614220 FAM13C-005 59246134-59362547 protein_coding
  ENST00000618427 FAM13C-201 59246130-59362594 protein_coding
  ENST00000618804 FAM13C-001 59246129-59362550 protein_coding
  ENST00000619059 FAM13C-011 59324071-59362522 nonsense_mediated_decay
  ENST00000621119 FAM13C-003 59246136-59362564 protein_coding
  ENST00000622363 FAM13C-010 59246136-59362590 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435852ENST00000468840ENST00000489341ENST00000510215ENST00000611933ENST00000614220ENST00000618427ENST00000618804ENST00000621119ENST00000622363
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.110±0.00 N/A N/A
ENST00000468840 0.697±0.00 N/A N/A N/A 1.576±0.04 0.712±0.25 N/A N/A 1.651±0.27 1.715±0.35 2.262±0.00 N/A N/A
ENST00000489341 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.906±0.00 N/A N/A N/A
ENST00000510215 N/A N/A N/A N/A N/A N/A N/A N/A 3.357±0.00 N/A N/A N/A N/A
ENST00000611933 0.416±0.00 0.769±0.00 3.918±0.00 1.533±0.61 0.711±0.26 0.821±0.00 0.365±0.00 0.390±0.18 1.111±0.50 N/A 0.871±0.28 0.669±0.11 N/A
ENST00000614220 N/A N/A N/A N/A N/A N/A 1.312±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618427 N/A N/A N/A N/A 0.937±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618804 N/A 2.075±0.00 8.208±2.87 0.906±0.00 1.104±0.78 0.656±0.20 N/A 1.356±0.00 N/A N/A 1.661±1.09 N/A 3.976±0.00
ENST00000621119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A N/A
ENST00000622363 N/A 1.118±0.00 N/A N/A N/A 0.491±0.00 N/A N/A 0.742±0.00 4.038±0.00 0.901±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I9 CIL_0002I9_0002 CGP 10:58513140-59247774
CIL_00090R CIL_00090R_0001 VISTA 10:58731418-59332389
CIL_0006P0 CIL_0006P0_0002 CGP 10:59176590-59363181
CIL_0006PE CIL_0006PE_0002 CGP 10:59246129-59736002

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002738 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000004686 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000029121 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000092255 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000093367 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000094224 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000094389 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000094644 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000096230 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSDARG00000096601 family with sequence similarity 13, member C protein_coding Danio_rerio
ENSMUSG00000043259 Fam13c family with sequence similarity 13, member C protein_coding Mus_musculus

Loading