C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148814 LRRC27 9606 + 10:132332154-132379918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344079 LRRC27-006 132332154-132353395 protein_coding
  ENST00000368612 LRRC27-009 132335108-132375455 protein_coding
  ENST00000368613 LRRC27-005 132332279-132375456 protein_coding
  ENST00000368614 LRRC27-004 132332200-132379918 protein_coding
  ENST00000450442 LRRC27-010 132336764-132348349 protein_coding
  ENST00000462656 LRRC27-007 132332226-132375457 processed_transcript
  ENST00000472387 LRRC27-012 132348192-132361589 processed_transcript
  ENST00000472556 LRRC27-001 132351607-132367001 processed_transcript
  ENST00000475747 LRRC27-008 132350400-132376028 processed_transcript
  ENST00000476889 LRRC27-002 132365471-132367001 processed_transcript
  ENST00000487000 LRRC27-013 132365481-132366843 processed_transcript
  ENST00000489204 LRRC27-003 132337666-132344867 processed_transcript
  ENST00000490055 LRRC27-011 132337138-132348092 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344079ENST00000368612ENST00000368613ENST00000368614ENST00000450442ENST00000462656ENST00000472387ENST00000472556ENST00000475747ENST00000490055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344079 N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A 9.444±0.00
ENST00000368612 N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A 1.276±0.20 1.123±0.61 N/A
ENST00000368613 0.438±0.00 0.950±0.00 N/A 4.483±2.23 0.685±0.56 1.688±0.00 0.463±0.00 3.533±0.00 0.568±0.00 3.403±0.00 N/A 5.775±0.00 N/A 37.521±2.15
ENST00000368614 N/A N/A N/A N/A 0.065±0.00 N/A 0.067±0.03 0.185±0.00 N/A N/A N/A 0.393±0.07 0.148±0.00 N/A
ENST00000450442 N/A N/A N/A N/A N/A 0.621±0.00 N/A N/A N/A 1.008±0.00 0.478±0.00 N/A 2.727±0.00 52.035±0.00
ENST00000462656 0.486±0.00 0.381±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.668±0.00 2.089±0.00 41.905±0.00
ENST00000472556 0.831±0.00 2.849±0.00 N/A N/A 1.830±0.00 1.386±0.00 N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A
ENST00000475747 N/A N/A 0.536±0.00 N/A 0.228±0.00 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A
ENST00000490055 N/A N/A N/A N/A N/A N/A N/A N/A 0.965±0.00 N/A N/A 0.800±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BF CIL_0000BF_0001 CGP 10:132207492-132379918
CIL_0008W3 CIL_0008W3_0001 VISTA 10:132328525-132933308
CIL_0000BE CIL_0000BE_0001 CGP 10:132332154-132417863

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000015980 Lrrc27 leucine rich repeat containing 27 protein_coding Mus_musculus

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