C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015980 Lrrc27 10090 + 7:139212988-139242979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016124 Lrrc27-001 139212988-139242979 protein_coding
  ENSMUST00000106104 Lrrc27-002 139213272-139229008 protein_coding
  ENSMUST00000126199 Lrrc27-007 139220611-139226111 processed_transcript
  ENSMUST00000126213 Lrrc27-003 139233943-139242971 processed_transcript
  ENSMUST00000130248 Lrrc27-008 139220898-139226204 retained_intron
  ENSMUST00000135509 Lrrc27-006 139214675-139221420 protein_coding
  ENSMUST00000142176 Lrrc27-004 139235893-139242972 processed_transcript
  ENSMUST00000152992 Lrrc27-009 139238613-139242976 processed_transcript
  ENSMUST00000156768 Lrrc27-005 139213011-139218291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016124ENSMUST00000106104ENSMUST00000126199ENSMUST00000126213ENSMUST00000142176ENSMUST00000152992
Transcript ID Adipose Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016124 1.683±0.55 1.458±0.00 0.702±0.10 0.456±0.10 0.140±0.05 0.601±0.00 0.366±0.08 0.684±0.00 0.609±0.40 79.642±19.89
ENSMUST00000106104 N/A N/A N/A N/A 0.161±0.04 N/A 0.164±0.06 0.509±0.00 0.739±0.00 52.859±3.44
ENSMUST00000126199 N/A N/A N/A N/A 0.632±0.00 N/A N/A N/A N/A N/A
ENSMUST00000126213 N/A N/A N/A N/A 0.514±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142176 N/A N/A 4.336±1.35 N/A N/A N/A 0.507±0.13 N/A N/A N/A
ENSMUST00000152992 N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LP CIL_0001LP_0002 CGP 7:139086001-139213307
CIL_0000BF CIL_0000BF_0002 CGP 7:139103638-139242979
CIL_0000BE CIL_0000BE_0002 CGP 7:139212988-139267253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148814 LRRC27 leucine rich repeat containing 27 protein_coding Homo_sapiens

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