C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrator complex subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149262 INTS4 9606 - 11:77878720-77994678 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000433818 INTS4-002 77878720-77994671 nonsense_mediated_decay
  ENST00000524766 INTS4-006 77981459-77994665 nonsense_mediated_decay
  ENST00000525268 INTS4-008 77901453-77924861 processed_transcript
  ENST00000525931 INTS4-007 77922353-77938771 processed_transcript
  ENST00000527522 INTS4-004 77987016-77994670 protein_coding
  ENST00000529807 INTS4-003 77924442-77994666 protein_coding
  ENST00000531059 INTS4-009 77921351-77922805 retained_intron
  ENST00000533180 INTS4-010 77901357-77921446 retained_intron
  ENST00000534064 INTS4-001 77878720-77994678 protein_coding
  ENST00000534408 INTS4-005 77977889-77994653 nonsense_mediated_decay
  ENST00000535943 INTS4-201 77878722-77911154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433818ENST00000529807ENST00000533180ENST00000534064ENST00000535943
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433818 N/A N/A 0.576±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.184±0.00 N/A N/A
ENST00000529807 N/A N/A 1.158±0.00 N/A 2.447±0.00 2.023±0.00 N/A N/A 3.256±0.00 N/A N/A N/A N/A N/A
ENST00000533180 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.797±0.00 N/A N/A N/A N/A
ENST00000534064 1.569±0.00 2.218±0.00 0.439±0.00 1.396±0.00 1.286±0.00 0.982±0.00 1.405±0.35 2.144±0.27 0.935±0.01 N/A 3.143±0.00 2.184±0.69 3.435±0.43 3.349±1.15
ENST00000535943 4.123±0.00 7.031±0.00 N/A 3.111±0.00 N/A 6.075±0.00 N/A 2.701±1.39 3.135±0.00 3.582±1.85 4.410±0.00 6.507±0.74 3.831±0.12 5.976±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JG CIL_0001JG_0002 CGP 11:77659996-77918432
CIL_0006V5 CIL_0006V5_0002 CGP 11:77821109-77994678
CIL_0001WU CIL_0001WU_0002 CGP 11:77878720-78080219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0016180 IDA snRNA processing
GO:0032039 IDA integrator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063610 INTS4 integrator complex subunit 4 protein_coding Danio_rerio
ENSMUSG00000025133 Ints4 integrator complex subunit 4 protein_coding Mus_musculus

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