C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149292 TTC12 9606 + 11:113314529-113383544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314756 TTC12-201 113316239-113373294 protein_coding
  ENST00000393020 TTC12-005 113314811-113383544 protein_coding
  ENST00000429951 TTC12-012 113314579-113324682 protein_coding
  ENST00000442859 TTC12-011 113314579-113338803 protein_coding
  ENST00000455306 TTC12-006 113314854-113329977 protein_coding
  ENST00000462711 TTC12-007 113362452-113371541 nonsense_mediated_decay
  ENST00000464224 TTC12-002 113314602-113366386 nonsense_mediated_decay
  ENST00000478125 TTC12-013 113341655-113359997 processed_transcript
  ENST00000480233 TTC12-009 113364381-113366387 processed_transcript
  ENST00000483239 TTC12-014 113316241-113366387 protein_coding
  ENST00000489064 TTC12-010 113315064-113324210 retained_intron
  ENST00000494714 TTC12-004 113314607-113373297 nonsense_mediated_decay
  ENST00000496311 TTC12-008 113364784-113366386 retained_intron
  ENST00000524580 TTC12-021 113315056-113339439 protein_coding
  ENST00000525965 TTC12-016 113314591-113340733 protein_coding
  ENST00000525989 TTC12-018 113329730-113338813 retained_intron
  ENST00000527362 TTC12-019 113325609-113360008 nonsense_mediated_decay
  ENST00000527781 TTC12-017 113316241-113325703 retained_intron
  ENST00000529221 TTC12-001 113314529-113366392 protein_coding
  ENST00000529850 TTC12-003 113314583-113338800 protein_coding
  ENST00000531164 TTC12-015 113314583-113338785 protein_coding
  ENST00000534793 TTC12-020 113335027-113339555 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314756ENST00000393020ENST00000464224ENST00000478125ENST00000480233ENST00000483239ENST00000529221ENST00000529850ENST00000531164
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314756 N/A N/A N/A 0.829±0.00 N/A N/A 0.970±0.61 0.773±0.00 1.110±0.18 0.546±0.00 1.975±0.19 N/A 6.276±0.00
ENST00000393020 N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464224 N/A N/A N/A 0.252±0.00 0.765±0.00 N/A N/A N/A N/A N/A N/A N/A 14.131±0.00
ENST00000478125 N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A
ENST00000480233 N/A N/A N/A N/A N/A N/A N/A 1.427±0.00 N/A 0.617±0.00 N/A N/A N/A
ENST00000483239 N/A 1.768±0.00 0.407±0.00 N/A N/A 0.142±0.00 N/A N/A 1.042±0.00 0.478±0.30 2.758±0.00 0.406±0.00 N/A
ENST00000529221 1.624±0.00 N/A N/A 1.764±0.00 1.996±0.00 1.850±0.00 1.226±0.00 1.670±0.77 1.447±0.00 N/A 3.909±3.00 2.449±1.51 32.684±12.71
ENST00000529850 N/A N/A N/A N/A N/A 0.636±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000531164 N/A N/A 1.114±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000864 CIL_000864_0001 VISTA 11:112722439-113324450
CIL_0006QW CIL_0006QW_0002 CGP 11:113314529-113400418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056896 ttc12 tetratricopeptide repeat domain 12 protein_coding Danio_rerio
ENSMUSG00000040219 Ttc12 tetratricopeptide repeat domain 12 protein_coding Mus_musculus

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