C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000864_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1810 VISTA 9606 11:112722439-113324450
GeneTranscriptPositionBiotype
ENSG00000149292 (TTC12)
tetratricopeptide repeat domain 12 		ENST00000314756 (TTC12-201) 113316239-113373294 protein_coding
ENST00000393020 (TTC12-005) 113314811-113383544 protein_coding
ENST00000429951 (TTC12-012) 113314579-113324682 protein_coding
ENST00000442859 (TTC12-011) 113314579-113338803 protein_coding
ENST00000455306 (TTC12-006) 113314854-113329977 protein_coding
ENST00000462711 (TTC12-007) 113362452-113371541 nonsense_mediated_decay
ENST00000464224 (TTC12-002) 113314602-113366386 nonsense_mediated_decay
ENST00000478125 (TTC12-013) 113341655-113359997 processed_transcript
ENST00000480233 (TTC12-009) 113364381-113366387 processed_transcript
ENST00000483239 (TTC12-014) 113316241-113366387 protein_coding
ENST00000489064 (TTC12-010) 113315064-113324210 retained_intron
ENST00000494714 (TTC12-004) 113314607-113373297 nonsense_mediated_decay
ENST00000496311 (TTC12-008) 113364784-113366386 retained_intron
ENST00000524580 (TTC12-021) 113315056-113339439 protein_coding
ENST00000525965 (TTC12-016) 113314591-113340733 protein_coding
ENST00000525989 (TTC12-018) 113329730-113338813 retained_intron
ENST00000527362 (TTC12-019) 113325609-113360008 nonsense_mediated_decay
ENST00000527781 (TTC12-017) 113316241-113325703 retained_intron
ENST00000529221 (TTC12-001) 113314529-113366392 protein_coding
ENST00000529850 (TTC12-003) 113314583-113338800 protein_coding
ENST00000531164 (TTC12-015) 113314583-113338785 protein_coding
ENST00000534793 (TTC12-020) 113335027-113339555 retained_intron
ENSG00000149294 (NCAM1)
neural cell adhesion molecule 1 		ENST00000316851 (NCAM1-001) 112961402-113278436 protein_coding
ENST00000401611 (NCAM1-008) 112961368-113263012 protein_coding
ENST00000524916 (NCAM1-027) 113255950-113263174 protein_coding
ENST00000525355 (NCAM1-021) 113233258-113260387 retained_intron
ENST00000525691 (NCAM1-022) 113240507-113260275 retained_intron
ENST00000525973 (NCAM1-016) 113130694-113205666 processed_transcript
ENST00000526322 (NCAM1-009) 113232325-113263267 protein_coding
ENST00000528158 (NCAM1-013) 113273020-113277866 processed_transcript
ENST00000528590 (NCAM1-012) 113233147-113275448 protein_coding
ENST00000529356 (NCAM1-005) 112961437-113221903 protein_coding
ENST00000530090 (NCAM1-024) 113260091-113263177 retained_intron
ENST00000530543 (NCAM1-020) 113232262-113260198 protein_coding
ENST00000531044 (NCAM1-004) 112961436-113275489 protein_coding
ENST00000531817 (NCAM1-010) 113232793-113263293 nonsense_mediated_decay
ENST00000531927 (NCAM1-025) 113260258-113273101 retained_intron
ENST00000533073 (NCAM1-011) 113232795-113275963 processed_transcript
ENST00000533226 (NCAM1-026) 113269969-113275282 retained_intron
ENST00000534046 (NCAM1-019) 113231380-113232748 retained_intron
ENST00000534516 (NCAM1-023) 113246108-113260317 retained_intron
ENST00000611284 (NCAM1-007) 113132928-113275564 processed_transcript
ENST00000613217 (NCAM1-018) 112961402-113232222 protein_coding
ENST00000615112 (NCAM1-201) 112961247-113278411 protein_coding
ENST00000615285 (NCAM1-202) 112961247-113278411 protein_coding
ENST00000615525 (NCAM1-028) 112961439-113133951 processed_transcript
ENST00000617166 (NCAM1-014) 112961425-113041216 processed_transcript
ENST00000618266 (NCAM1-203) 112961247-113278411 protein_coding
ENST00000619839 (NCAM1-002) 112961275-113275387 protein_coding
ENST00000620046 (NCAM1-015) 112961435-113270239 protein_coding
ENST00000621128 (NCAM1-003) 112961368-113265197 protein_coding
ENST00000621518 (NCAM1-204) 112961247-113265195 protein_coding
ENST00000621850 (NCAM1-006) 112961480-113263293 protein_coding
ENSG00000238998 (RNU7-187P)
RNA, U7 small nuclear 187 pseudogene 		ENST00000458985 (RNU7-187P-201) 112977353-112977420 snRNA
ENSG00000255129 (RP11-839D17.3)
 ENST00000526487 (RP11-839D17.3-002) 113278553-113314424 antisense
ENST00000529416 (RP11-839D17.3-003) 113278437-113283990 antisense
ENST00000533504 (RP11-839D17.3-001) 113279383-113314437 antisense
CIL_000864_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1810 VISTA 10090 9:49436439-50038292
GeneTranscriptPositionBiotype
ENSMUSG00000039542 (Ncam1)
neural cell adhesion molecule 1 		ENSMUST00000114476 (Ncam1-201) 49517506-49798922 protein_coding
ENSMUST00000166811 (Ncam1-202) 49504361-49798729 protein_coding
ENSMUSG00000040219 (Ttc12)
tetratricopeptide repeat domain 12 		ENSMUST00000055096 (Ttc12-001) 49436963-49486225 protein_coding
ENSMUST00000146666 (Ttc12-002) 49457578-49486215 retained_intron
ENSMUSG00000079564 (Gm11149)
predicted gene 11149 		ENSMUST00000068730 (Gm11149-201) 49518336-49562944 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000864_0001ENSG00000149292ENST00000314756ENST00000393020ENST00000464224ENST00000478125ENST00000480233ENST00000483239ENST00000529221ENST00000529850ENST00000531164ENSG00000149294ENST00000316851ENST00000401611ENST00000525973ENST00000528158ENST00000531044ENST00000533073ENST00000611284ENST00000615112ENST00000615285ENST00000618266ENST00000621128ENST00000621518ENST00000621850ENSG00000238998ENST00000458985ENSG00000255129ENST00000526487ENST00000529416ENST00000533504CIL_000864_0002ENSMUSG00000039542ENSMUST00000114476ENSMUST00000166811ENSMUSG00000040219ENSMUST00000055096ENSMUST00000146666ENSMUSG00000079564ENSMUST00000068730
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149292 ENST00000314756 N/A N/A N/A N/A 0.829±0.00 N/A N/A 0.970±0.61 0.773±0.00 1.110±0.18 0.546±0.00 1.975±0.19 N/A 6.276±0.00
ENST00000393020 N/A N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464224 N/A N/A N/A N/A 0.252±0.00 0.765±0.00 N/A N/A N/A N/A N/A N/A N/A 14.131±0.00
ENST00000478125 N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A
ENST00000480233 N/A N/A N/A N/A N/A N/A N/A N/A 1.427±0.00 N/A 0.617±0.00 N/A N/A N/A
ENST00000483239 N/A N/A 1.768±0.00 0.407±0.00 N/A N/A 0.142±0.00 N/A N/A 1.042±0.00 0.478±0.30 2.758±0.00 0.406±0.00 N/A
ENST00000489064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529221 N/A 1.624±0.00 N/A N/A 1.764±0.00 1.996±0.00 1.850±0.00 1.226±0.00 1.670±0.77 1.447±0.00 N/A 3.909±3.00 2.449±1.51 32.684±12.71
ENST00000529850 N/A N/A N/A N/A N/A N/A 0.636±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000531164 N/A N/A N/A 1.114±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149294 ENST00000316851 N/A 1.777±0.00 N/A 9.522±0.00 0.561±0.00 N/A N/A N/A N/A N/A N/A 2.529±0.00 0.206±0.01 4.013±0.00
ENST00000401611 N/A N/A N/A 24.521±0.00 N/A 1.546±0.00 8.199±0.00 0.342±0.00 5.460±0.00 0.207±0.00 N/A N/A N/A N/A
ENST00000524916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525973 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.357±0.00 2.451±0.00 N/A N/A N/A
ENST00000526322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528158 N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A 0.255±0.00 0.663±0.60 0.285±0.01 1.245±0.00
ENST00000528590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531044 N/A N/A 0.318±0.00 49.873±0.00 0.829±0.00 N/A N/A N/A 3.787±0.00 N/A N/A N/A 0.168±0.00 N/A
ENST00000531817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A
ENST00000533226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.342±0.00
ENST00000613217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A N/A
ENST00000615285 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618266 N/A 1.190±0.00 N/A 16.623±0.00 0.217±0.00 N/A N/A 0.241±0.00 0.091±0.00 0.126±0.00 N/A N/A N/A 0.947±0.00
ENST00000619839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621128 0.526±0.00 1.392±0.00 N/A 59.444±0.00 0.267±0.00 10.743±0.00 N/A 0.325±0.00 2.554±0.00 0.392±0.00 N/A 1.760±1.74 0.123±0.00 N/A
ENST00000621518 N/A N/A N/A N/A N/A 0.498±0.00 36.690±0.00 N/A N/A N/A N/A N/A N/A 1.777±0.00
ENST00000621850 N/A N/A N/A N/A 1.445±0.00 N/A 5.810±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000238998 ENST00000458985 N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255129 ENST00000526487 N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A 0.306±0.00 0.019±0.00 N/A
ENST00000529416 N/A N/A N/A N/A 0.096±0.00 N/A 0.086±0.00 N/A N/A N/A N/A N/A 0.108±0.01 N/A
ENST00000533504 N/A 0.109±0.00 N/A 1.054±0.00 0.127±0.00 N/A 0.070±0.00 0.137±0.00 0.359±0.00 N/A N/A 0.495±0.00 0.236±0.00 0.639±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039542 ENSMUST00000114476 0.655±0.72 1.010±0.09 N/A 59.583±2.94 0.233±0.14 0.883±0.27 0.911±0.09 0.326±0.13 0.097±0.09 0.269±0.16 1.131±0.39 1.399±0.42 3.013±0.00 1.590±0.18
ENSMUST00000166811 0.735±0.60 1.092±0.18 N/A 10.867±2.42 0.160±0.03 1.170±0.57 0.230±0.07 0.392±0.05 0.354±0.07 0.188±0.02 0.227±0.09 2.026±0.62 2.795±1.90 1.008±0.23
ENSMUSG00000040219 ENSMUST00000055096 0.589±0.23 0.365±0.00 2.447±1.58 0.814±0.52 0.440±0.22 0.280±0.18 2.074±1.02 1.475±0.25 0.101±0.05 1.337±0.11 0.462±0.11 3.067±2.33 0.672±0.62 7.219±4.37
ENSMUST00000146666 N/A 0.424±0.09 1.128±0.00 0.725±0.00 0.150±0.00 0.215±0.03 N/A N/A 0.055±0.02 N/A 0.198±0.00 2.988±0.40 0.338±0.10 15.779±0.00
ENSMUSG00000079564 ENSMUST00000068730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.055±0.48

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