C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FSHD region gene 1 family, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149531 FRG1B 9606 + 20:30377181-30399334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278882 FRG1B-001 30377181-30399334 protein_coding
  ENST00000358464 FRG1B-201 30377203-30399330 protein_coding
  ENST00000468180 FRG1B-003 30377181-30378385 processed_transcript
  ENST00000479318 FRG1B-002 30391197-30397251 nonsense_mediated_decay
  ENST00000482423 FRG1B-004 30377585-30388578 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278882ENST00000358464ENST00000479318ENST00000482423
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278882 N/A 3.423±0.00 N/A 1.235±0.00 0.727±0.00 N/A N/A 0.776±0.00 0.572±0.00 N/A 1.944±0.00 0.792±0.00 1.018±0.10
ENST00000358464 2.277±0.00 1.701±0.00 4.960±0.00 1.203±0.40 1.628±0.70 1.286±1.14 1.070±0.04 1.006±0.49 1.806±0.00 0.611±0.00 3.271±2.53 3.748±2.01 2.490±0.57
ENST00000479318 0.547±0.00 1.224±0.00 1.113±0.68 0.743±0.00 0.818±0.00 1.031±0.00 0.623±0.00 0.975±0.00 0.714±0.00 N/A 2.367±1.44 3.484±0.00 0.862±0.00
ENST00000482423 1.608±0.00 2.184±0.00 2.274±1.59 N/A 2.166±0.00 2.183±0.00 N/A 1.374±0.00 2.125±0.00 0.334±0.00 4.418±3.39 5.132±2.19 2.834±1.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056504 FRG1 FSHD region gene 1 protein_coding Danio_rerio
ENSMUSG00000031590 Frg1 FSHD region gene 1 protein_coding Mus_musculus

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