C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FSHD region gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031590 Frg1 10090 - 8:41397457-41417118 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033999 Frg1-201 41397457-41417118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033999 4.439±2.04 6.034±1.70 17.040±2.14 19.429±8.89 5.587±1.06 7.154±3.18 3.611±0.48 5.183±1.56 10.337±5.63 3.795±1.41 7.800±0.57 14.001±19.73 48.260±35.87 17.131±18.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QQ CIL_0001QQ_0002 CGP 8:41340197-41417118

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0006397 IEA mRNA processing
GO:0007517 IEA muscle organ development
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056504 FRG1 FSHD region gene 1 protein_coding Danio_rerio
ENSG00000109536 FRG1 FSHD region gene 1 protein_coding Homo_sapiens
ENSG00000149531 FRG1B FSHD region gene 1 family, member B protein_coding Homo_sapiens
ENSG00000273748 AL592183.1 protein_coding Homo_sapiens
ENSG00000280297 ABBA01031664.1 protein_coding Homo_sapiens

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