C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kin of IRRE like 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149571 KIRREL3 9606 - 11:126423359-127003460 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000416561 KIRREL3-201 126423359-126562917 protein_coding
  ENST00000525144 KIRREL3-001 126423359-127000759 protein_coding
  ENST00000525704 KIRREL3-003 126430942-127000810 protein_coding
  ENST00000526519 KIRREL3-007 126429179-126440869 processed_transcript
  ENST00000526764 KIRREL3-005 126436864-126440818 retained_intron
  ENST00000529097 KIRREL3-004 126423495-127000520 protein_coding
  ENST00000532647 KIRREL3-006 126429179-126440882 processed_transcript
  ENST00000533026 KIRREL3-002 126549284-127003460 processed_transcript
  ENST00000547738 KIRREL3-009 126549418-127001165 processed_transcript
  ENST00000549874 KIRREL3-008 126549539-127000770 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000416561ENST00000525144ENST00000525704ENST00000526764ENST00000529097ENST00000532647ENST00000533026ENST00000547738ENST00000549874
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000416561 N/A 0.107±0.00 N/A 0.193±0.00 N/A N/A N/A 0.036±0.00 N/A N/A 0.659±0.63 0.185±0.10 N/A
ENST00000525144 N/A N/A 1.246±0.00 0.173±0.00 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.267±0.14 0.121±0.00
ENST00000525704 N/A N/A N/A 0.138±0.00 N/A 0.040±0.00 0.050±0.00 N/A N/A 0.046±0.00 0.020±0.00 N/A 0.144±0.00
ENST00000526764 N/A N/A N/A 0.304±0.00 N/A N/A 0.088±0.00 0.245±0.00 N/A N/A 0.367±0.00 0.300±0.00 0.528±0.00
ENST00000529097 0.056±0.00 N/A N/A N/A 0.688±0.00 0.042±0.01 0.143±0.00 0.214±0.00 0.038±0.00 N/A N/A N/A 0.174±0.00
ENST00000532647 N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A 0.836±0.00 N/A 0.301±0.00 N/A N/A
ENST00000533026 0.243±0.00 N/A N/A 0.109±0.00 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A
ENST00000549874 N/A 0.464±0.00 N/A 0.079±0.00 N/A 0.180±0.00 0.057±0.00 0.037±0.00 0.185±0.00 0.119±0.00 N/A N/A 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050Y CIL_00050Y_0002 CGP 11:126423359-128587558

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0002121 IEA inter-male aggressive behavior
GO:0005515 IEA protein binding
GO:0005576 ISS extracellular region
GO:0005886 TAS plasma membrane
GO:0016021 ISS integral component of membrane
GO:0021740 IEA principal sensory nucleus of trigeminal nerve development
GO:0030097 ISS hemopoiesis
GO:0030424 IEA axon
GO:0043198 IEA dendritic shaft
GO:0048812 IEA neuron projection morphogenesis
GO:0072102 IEA glomerulus morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060939 KIRREL3 (1 of 3) kin of IRRE like 3 (Drosophila) protein_coding Danio_rerio
ENSDARG00000075806 kirrel3a kin of IRRE like 3 a protein_coding Danio_rerio
ENSDARG00000086919 CABZ01073963.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000032036 Kirrel3 kin of IRRE like 3 (Drosophila) protein_coding Mus_musculus

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