C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kin of IRRE like 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032036 Kirrel3 10090 + 9:34485894-35036716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045091 Kirrel3-002 34488795-35036716 protein_coding
  ENSMUST00000115148 Kirrel3-201 34486126-35035280 protein_coding
  ENSMUST00000183580 Kirrel3-007 34486125-34510616 processed_transcript
  ENSMUST00000184203 Kirrel3-008 34485894-34489158 protein_coding
  ENSMUST00000187182 Kirrel3-006 34488936-35036310 protein_coding
  ENSMUST00000187625 Kirrel3-001 34488733-35036716 protein_coding
  ENSMUST00000188658 Kirrel3-004 35016452-35030876 protein_coding
  ENSMUST00000188933 Kirrel3-005 34488828-35036310 protein_coding
  ENSMUST00000190549 Kirrel3-003 34488795-35030878 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045091ENSMUST00000115148ENSMUST00000187182ENSMUST00000187625ENSMUST00000188658ENSMUST00000188933ENSMUST00000190549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045091 N/A 0.127±0.06 N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 0.076±0.00 0.395±0.07 N/A N/A
ENSMUST00000115148 0.122±0.08 N/A N/A N/A 0.141±0.09 0.171±0.02 0.193±0.00 0.051±0.02 0.011±0.00 N/A 0.075±0.00 0.205±0.00 N/A N/A
ENSMUST00000187182 N/A 0.181±0.03 N/A N/A N/A 0.125±0.00 0.178±0.11 0.099±0.06 N/A N/A 0.158±0.08 0.222±0.02 0.377±0.31 0.114±0.02
ENSMUST00000187625 0.128±0.09 N/A 0.028±0.01 1.736±0.35 0.091±0.00 0.130±0.00 0.050±0.00 N/A 0.081±0.00 N/A 0.082±0.00 0.522±0.00 0.070±0.06 0.077±0.03
ENSMUST00000188658 N/A 0.261±0.06 0.034±0.00 N/A N/A N/A N/A N/A 0.049±0.03 N/A 0.059±0.02 0.246±0.03 N/A 0.037±0.00
ENSMUST00000188933 0.545±0.36 N/A 0.059±0.02 10.579±4.16 0.330±0.15 0.213±0.07 0.127±0.03 0.176±0.06 N/A 0.306±0.02 0.114±0.03 0.326±0.13 0.457±0.40 N/A
ENSMUST00000190549 N/A 0.084±0.00 N/A N/A 0.118±0.03 N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.029±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086K CIL_00086K_0002 VISTA 9:34257589-34859390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0002121 IMP inter-male aggressive behavior
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0021740 IMP principal sensory nucleus of trigeminal nerve development
GO:0030097 IDA hemopoiesis
GO:0030165 NAS PDZ domain binding
GO:0030424 IDA axon
GO:0043198 IDA dendritic shaft
GO:0048812 IMP neuron projection morphogenesis
GO:0072102 IMP glomerulus morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060939 KIRREL3 (1 of 3) kin of IRRE like 3 (Drosophila) protein_coding Danio_rerio
ENSDARG00000075806 kirrel3a kin of IRRE like 3 a protein_coding Danio_rerio
ENSDARG00000086919 CABZ01073963.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000149571 KIRREL3 kin of IRRE like 3 (Drosophila) protein_coding Homo_sapiens

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