C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transgelin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149591 TAGLN 9606 + 11:117199321-117204782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278968 TAGLN-006 117199394-117204782 protein_coding
  ENST00000392951 TAGLN-001 117199321-117204557 protein_coding
  ENST00000525531 TAGLN-008 117199382-117204541 protein_coding
  ENST00000529622 TAGLN-004 117203144-117204405 protein_coding
  ENST00000529792 TAGLN-007 117200255-117203401 protein_coding
  ENST00000530649 TAGLN-005 117201750-117204776 protein_coding
  ENST00000532870 TAGLN-003 117201873-117204778 protein_coding
  ENST00000533863 TAGLN-002 117201166-117204760 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392951ENST00000529622ENST00000529792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392951 218.387±0.00 472.043±0.00 17.744±0.00 18.776±11.63 160.787±65.31 745.435±550.30 34.455±22.44 40.086±32.37 311.920±296.16 212.428±170.59 31.057±0.00 494.688±481.40 401.623±284.24 194.559±156.68
ENST00000529622 1003.010±0.00 1703.310±0.00 N/A 82.628±0.00 428.760±0.00 3321.770±0.00 40.962±0.00 321.977±0.00 40.858±0.00 N/A 67.095±0.00 352.383±219.25 262.588±0.00 566.570±495.96
ENST00000529792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 86.412±0.00 104.722±0.00 311.292±0.00 83.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007517 TAS muscle organ development
GO:0030855 IDA epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033466 tagln2 transgelin 2 protein_coding Danio_rerio
ENSDARG00000045408 tagln transgelin protein_coding Danio_rerio
ENSMUSG00000032085 Tagln transgelin protein_coding Mus_musculus

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