C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transgelin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392951 TAGLN-001 ENSG00000149591 9606 + 11:117199321-117204557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392951 218.387±0.00 472.043±0.00 17.744±0.00 18.776±11.63 160.787±65.31 745.435±550.30 34.455±22.44 40.086±32.37 311.920±296.16 212.428±170.59 31.057±0.00 494.688±481.40 401.623±284.24 194.559±156.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007517 TAS muscle organ development
GO:0030855 IDA epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034590 Tagln-201 protein_coding Mus_musculus 0 885

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