C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oral cancer overexpressed 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149716 ORAOV1 9606 - 11:69653076-69675416 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279147 ORAOV1-001 69665563-69675347 protein_coding
  ENST00000355486 ORAOV1-006 69672870-69675311 retained_intron
  ENST00000441922 ORAOV1-005 69667511-69675247 nonsense_mediated_decay
  ENST00000535542 ORAOV1-011 69667264-69675305 nonsense_mediated_decay
  ENST00000535657 ORAOV1-009 69666667-69675321 protein_coding
  ENST00000536870 ORAOV1-004 69665566-69675323 protein_coding
  ENST00000537272 ORAOV1-010 69665649-69668012 protein_coding
  ENST00000537324 ORAOV1-015 69667609-69668398 processed_transcript
  ENST00000538554 ORAOV1-017 69653076-69675344 protein_coding
  ENST00000539414 ORAOV1-014 69667506-69675322 protein_coding
  ENST00000542341 ORAOV1-003 69671378-69675416 protein_coding
  ENST00000542470 ORAOV1-013 69667042-69671922 retained_intron
  ENST00000542515 ORAOV1-018 69653076-69658430 processed_transcript
  ENST00000543023 ORAOV1-008 69673222-69675295 retained_intron
  ENST00000543562 ORAOV1-007 69667494-69675350 nonsense_mediated_decay
  ENST00000543863 ORAOV1-012 69667445-69674751 processed_transcript
  ENST00000544096 ORAOV1-002 69665566-69673384 retained_intron
  ENST00000569105 ORAOV1-019 69653173-69673295 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279147ENST00000536870ENST00000538554ENST00000544096ENST00000569105
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279147 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.011±0.00 N/A 4.486±0.00
ENST00000536870 N/A 6.218±0.00 N/A N/A N/A N/A N/A N/A 1.211±0.31 N/A N/A N/A
ENST00000538554 12.456±0.00 13.535±0.00 11.808±0.00 95.472±0.00 10.181±0.00 20.995±0.00 42.864±0.00 30.712±0.00 N/A N/A 29.604±0.00 25.459±0.00
ENST00000544096 N/A N/A 0.813±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.309±0.00
ENST00000569105 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.848±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TF CIL_0007TF_0001 VISTA 11:69193417-69797766
CIL_0001SO CIL_0001SO_0002 CGP 11:69641087-69675416

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074700 oraov1 oral cancer overexpressed 1 protein_coding Danio_rerio
ENSMUSG00000031072 Oraov1 oral cancer overexpressed 1 protein_coding Mus_musculus

Loading