C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007TF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1920 VISTA 9606 11:69193417-69797766
GeneTranscriptPositionBiotype
ENSG00000075388 (FGF4)
fibroblast growth factor 4 		ENST00000168712 (FGF4-001) 69771016-69775403 protein_coding
ENST00000538040 (FGF4-002) 69773349-69775164 processed_transcript
ENSG00000110092 (CCND1)
cyclin D1 		ENST00000227507 (CCND1-001) 69641087-69654474 protein_coding
ENST00000535993 (CCND1-003) 69641231-69643317 retained_intron
ENST00000536559 (CCND1-004) 69641206-69648240 protein_coding
ENST00000539241 (CCND1-002) 69641165-69644188 retained_intron
ENST00000542367 (CCND1-006) 69647957-69651407 retained_intron
ENST00000545484 (CCND1-005) 69643712-69648143 retained_intron
ENSG00000149716 (ORAOV1)
oral cancer overexpressed 1 		ENST00000279147 (ORAOV1-001) 69665563-69675347 protein_coding
ENST00000355486 (ORAOV1-006) 69672870-69675311 retained_intron
ENST00000441922 (ORAOV1-005) 69667511-69675247 nonsense_mediated_decay
ENST00000535542 (ORAOV1-011) 69667264-69675305 nonsense_mediated_decay
ENST00000535657 (ORAOV1-009) 69666667-69675321 protein_coding
ENST00000536870 (ORAOV1-004) 69665566-69675323 protein_coding
ENST00000537272 (ORAOV1-010) 69665649-69668012 protein_coding
ENST00000537324 (ORAOV1-015) 69667609-69668398 processed_transcript
ENST00000538554 (ORAOV1-017) 69653076-69675344 protein_coding
ENST00000539414 (ORAOV1-014) 69667506-69675322 protein_coding
ENST00000542341 (ORAOV1-003) 69671378-69675416 protein_coding
ENST00000542470 (ORAOV1-013) 69667042-69671922 retained_intron
ENST00000542515 (ORAOV1-018) 69653076-69658430 processed_transcript
ENST00000543023 (ORAOV1-008) 69673222-69675295 retained_intron
ENST00000543562 (ORAOV1-007) 69667494-69675350 nonsense_mediated_decay
ENST00000543863 (ORAOV1-012) 69667445-69674751 processed_transcript
ENST00000544096 (ORAOV1-002) 69665566-69673384 retained_intron
ENST00000569105 (ORAOV1-019) 69653173-69673295 processed_transcript
ENSG00000162344 (FGF19)
fibroblast growth factor 19 		ENST00000294312 (FGF19-001) 69698232-69704642 protein_coding
ENSG00000172927 (MYEOV)
myeloma overexpressed 		ENST00000308946 (MYEOV-004) 69294155-69297287 protein_coding
ENST00000441339 (MYEOV-002) 69294138-69296885 protein_coding
ENST00000535407 (MYEOV-001) 69294158-69297287 protein_coding
ENST00000535597 (MYEOV-007) 69295586-69296171 processed_transcript
ENST00000535653 (MYEOV-003) 69294164-69297287 retained_intron
ENST00000535660 (MYEOV-011) 69316832-69341677 processed_transcript
ENST00000539691 (MYEOV-006) 69294155-69295850 processed_transcript
ENST00000540356 (MYEOV-010) 69341556-69367415 processed_transcript
ENST00000540760 (MYEOV-005) 69294174-69295662 processed_transcript
ENST00000541137 (MYEOV-012) 69337360-69367726 processed_transcript
ENST00000544008 (MYEOV-008) 69294151-69341682 processed_transcript
ENST00000544781 (MYEOV-009) 69299274-69367003 retained_intron
ENSG00000213275 (IFITM9P)
interferon induced transmembrane protein 9 pseudogene 		ENST00000535743 (IFITM9P-001) 69303412-69303807 processed_pseudogene
ENSG00000255774 (AP000439.3)
 ENST00000542064 (AP000439.3-001) 69477133-69479940 lincRNA
ENSG00000255980 (AP000439.1)
 ENST00000545202 (AP000439.1-001) 69425690-69429621 lincRNA
ENSG00000256441 (RP11-300I6.5)
 ENST00000413963 (RP11-300I6.5-001) 69737298-69738017 processed_pseudogene
ENSG00000259854 (RP11-211G23.1)
 ENST00000562341 (RP11-211G23.1-001) 69414307-69416832 lincRNA
ENSG00000260877 (RP11-211G23.2)
 ENST00000561588 (RP11-211G23.2-001) 69371463-69372511 lincRNA
ENSG00000261347 (AP000439.5)
 ENST00000567742 (AP000439.5-001) 69467598-69469705 lincRNA
CIL_0007TF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1920 VISTA 10090 7:144693485-145297342
GeneTranscriptPositionBiotype
ENSMUSG00000031072 (Oraov1)
oral cancer overexpressed 1 		ENSMUST00000033388 (Oraov1-001) 144915135-144921134 protein_coding
ENSMUST00000093964 (Oraov1-003) 144915171-144917701 retained_intron
ENSMUST00000105895 (Oraov1-006) 144915180-144929495 protein_coding
ENSMUST00000128057 (Oraov1-002) 144915100-144930748 protein_coding
ENSMUST00000141737 (Oraov1-004) 144915173-144916457 processed_transcript
ENSMUST00000147460 (Oraov1-005) 144916136-144919829 retained_intron
ENSMUSG00000031073 (Fgf15)
fibroblast growth factor 15 		ENSMUST00000033389 (Fgf15-201) 144896532-144900953 protein_coding
ENSMUSG00000031074 (Fgf3)
fibroblast growth factor 3 		ENSMUST00000105898 (Fgf3-001) 144838595-144844436 protein_coding
ENSMUST00000155320 (Fgf3-002) 144838083-144842719 protein_coding
ENSMUSG00000031075 (Ano1)
anoctamin 1, calcium activated chloride channel 		ENSMUST00000033393 (Ano1-201) 144588553-144738592 protein_coding
ENSMUST00000118556 (Ano1-001) 144588549-144738566 protein_coding
ENSMUST00000121758 (Ano1-002) 144588549-144738543 protein_coding
ENSMUST00000131571 (Ano1-007) 144595442-144608295 retained_intron
ENSMUST00000131731 (Ano1-004) 144655601-144678885 protein_coding
ENSMUST00000141632 (Ano1-005) 144654095-144669377 retained_intron
ENSMUST00000152531 (Ano1-006) 144621668-144669380 protein_coding
ENSMUST00000155175 (Ano1-003) 144650503-144751974 protein_coding
ENSMUSG00000048677 (Tpcn2)
two pore segment channel 2 		ENSMUST00000058022 (Tpcn2-201) 145253923-145283927 protein_coding
ENSMUSG00000050917 (Fgf4)
fibroblast growth factor 4 		ENSMUST00000060336 (Fgf4-201) 144861386-144865243 protein_coding
ENSMUSG00000070348 (Ccnd1)
cyclin D1 		ENSMUST00000093962 (Ccnd1-001) 144929931-144939869 protein_coding
ENSMUST00000135985 (Ccnd1-002) 144937295-144938197 retained_intron
ENSMUSG00000096999 (Gm26793)
predicted gene, 26793 		ENSMUST00000180930 (Gm26793-201) 144894560-144897461 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TF_0001ENSG00000075388ENST00000168712ENST00000538040ENSG00000110092ENST00000227507ENST00000535993ENST00000536559ENST00000539241ENST00000542367ENST00000545484ENSG00000149716ENST00000279147ENST00000355486ENST00000441922ENST00000535542ENST00000535657ENST00000536870ENST00000537272ENST00000537324ENST00000538554ENST00000539414ENST00000542341ENST00000542470ENST00000542515ENST00000543023ENST00000543562ENST00000543863ENST00000544096ENST00000569105ENSG00000162344ENST00000294312ENSG00000172927ENST00000308946ENST00000441339ENST00000535407ENST00000535597ENST00000535653ENST00000535660ENST00000539691ENST00000540356ENST00000540760ENST00000541137ENST00000544008ENST00000544781ENSG00000213275ENST00000535743ENSG00000255774ENST00000542064ENSG00000255980ENST00000545202ENSG00000256441ENST00000413963ENSG00000259854ENST00000562341ENSG00000260877ENST00000561588ENSG00000261347ENST00000567742CIL_0007TF_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TF_0001ENSG00000075388ENST00000168712ENSG00000110092ENST00000227507ENST00000542367ENSG00000149716ENST00000279147ENST00000536870ENST00000538554ENST00000544096ENST00000569105ENSG00000162344ENST00000294312ENSG00000172927ENST00000308946ENST00000441339ENST00000535407ENST00000535597ENST00000535653ENST00000539691ENST00000540356ENST00000540760ENST00000541137ENST00000544781ENSG00000213275ENST00000535743ENSG00000255774ENST00000542064ENSG00000255980ENST00000545202ENSG00000256441ENST00000413963ENSG00000259854ENST00000562341ENSG00000260877ENST00000561588ENSG00000261347ENST00000567742CIL_0007TF_0002ENSMUSG00000031072ENSMUST00000033388ENSMUST00000093964ENSMUSG00000031073ENSMUST00000033389ENSMUSG00000031074ENSMUST00000105898ENSMUST00000155320ENSMUSG00000031075ENSMUST00000033393ENSMUST00000121758ENSMUST00000131571ENSMUST00000131731ENSMUST00000152531ENSMUST00000155175ENSMUSG00000048677ENSMUST00000058022ENSMUSG00000050917ENSMUST00000060336ENSMUSG00000070348ENSMUST00000093962ENSMUSG00000096999ENSMUST00000180930
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075388 ENST00000168712 N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.068±0.03 N/A N/A 0.021±0.00 N/A N/A 0.334±0.00
ENST00000538040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000110092 ENST00000227507 10.005±0.00 N/A 7.463±0.00 3.356±1.06 52.867±37.07 5.603±1.29 9.681±3.83 10.526±0.55 26.022±11.56 14.958±6.94 1.157±0.13 9.432±2.96 45.548±10.52 8.735±6.73
ENST00000535993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.185±0.00 N/A N/A N/A
ENST00000545484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149716 ENST00000279147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.011±0.00 N/A 4.486±0.00
ENST00000355486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536870 N/A 6.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.211±0.31 N/A N/A N/A
ENST00000537272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538554 12.456±0.00 13.535±0.00 N/A 11.808±0.00 95.472±0.00 10.181±0.00 N/A 20.995±0.00 42.864±0.00 30.712±0.00 N/A N/A 29.604±0.00 25.459±0.00
ENST00000539414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544096 N/A N/A N/A 0.813±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.309±0.00
ENST00000569105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.848±0.00 N/A N/A
ENSG00000162344 ENST00000294312 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A 0.073±0.00 N/A N/A N/A 0.079±0.00 0.238±0.00
ENSG00000172927 ENST00000308946 0.714±0.00 N/A N/A N/A 11.552±0.00 0.093±0.00 N/A N/A 0.753±0.00 N/A N/A 0.231±0.00 0.066±0.04 N/A
ENST00000441339 0.305±0.00 N/A N/A 0.013±0.00 N/A N/A 0.012±0.00 0.120±0.00 N/A 0.085±0.00 N/A 0.153±0.14 N/A 0.120±0.00
ENST00000535407 N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00
ENST00000535653 0.356±0.00 N/A N/A N/A 8.670±0.00 0.304±0.00 N/A N/A 0.757±0.00 N/A N/A 0.667±0.00 N/A N/A
ENST00000535660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539691 N/A 0.161±0.00 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000540356 N/A 0.155±0.00 N/A 0.042±0.00 N/A N/A 0.071±0.00 0.077±0.00 N/A N/A N/A 0.068±0.00 N/A N/A
ENST00000540760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00
ENST00000541137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.05
ENST00000544008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A
ENSG00000213275 ENST00000535743 0.281±0.00 0.297±0.00 N/A N/A 0.084±0.00 0.076±0.00 0.070±0.00 0.258±0.02 0.467±0.00 0.434±0.00 0.064±0.00 0.119±0.00 N/A 0.494±0.00
ENSG00000255774 ENST00000542064 N/A N/A N/A N/A 0.414±0.31 1.665±1.19 N/A N/A 0.202±0.00 N/A N/A 0.501±0.29 N/A 0.028±0.00
ENSG00000255980 ENST00000545202 N/A 0.023±0.00 N/A 0.097±0.08 0.016±0.00 N/A N/A N/A 0.035±0.00 N/A N/A 0.023±0.00 0.582±0.12 0.080±0.06
ENSG00000256441 ENST00000413963 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENSG00000259854 ENST00000562341 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000260877 ENST00000561588 0.195±0.00 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 0.791±0.00 N/A
ENSG00000261347 ENST00000567742 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A 0.122±0.06 0.031±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031072 ENSMUST00000033388 8.304±0.39 N/A 14.587±0.00 9.112±2.41 6.675±0.00 N/A 5.191±0.34 N/A 7.307±1.27 N/A 3.788±0.34 8.139±0.21 11.318±2.64 5.339±0.92
ENSMUST00000093964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.059±16.75
ENSMUST00000105895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031073 ENSMUST00000033389 N/A 0.068±0.04 N/A 9.886±1.07 N/A 0.057±0.00 N/A N/A 0.016±0.02 N/A N/A N/A 0.004±0.00 0.052±0.02
ENSMUSG00000031074 ENSMUST00000105898 0.025±0.01 0.237±0.06 N/A 1.850±1.19 0.018±0.00 0.027±0.01 N/A N/A 0.070±0.04 N/A 0.023±0.00 N/A 0.060±0.04 0.020±0.01
ENSMUST00000155320 0.050±0.01 1.264±0.39 N/A 1.410±0.48 N/A 0.119±0.03 N/A N/A N/A 0.046±0.00 N/A N/A 0.123±0.07 0.040±0.01
ENSMUSG00000031075 ENSMUST00000033393 4.183±2.70 6.689±1.81 N/A 2.693±0.40 5.280±1.66 8.511±0.96 0.935±0.48 1.722±0.61 0.483±0.25 6.363±1.38 0.246±0.00 18.392±3.89 0.906±0.00 4.128±2.10
ENSMUST00000118556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121758 5.213±4.05 N/A 11.767±0.00 0.569±0.17 N/A N/A 1.276±0.17 0.876±0.40 0.400±0.20 4.411±0.00 0.912±0.43 8.938±2.36 0.949±0.69 1.477±0.70
ENSMUST00000131571 N/A N/A N/A N/A 40.204±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131731 N/A N/A N/A N/A 17.551±0.77 40.851±7.04 N/A N/A N/A 25.715±0.00 N/A 28.372±3.20 N/A N/A
ENSMUST00000141632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.374±0.00 N/A N/A
ENSMUST00000155175 N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000048677 ENSMUST00000058022 6.826±2.25 3.715±1.24 6.645±1.93 0.726±0.23 4.965±1.75 4.500±0.86 1.572±0.35 1.696±0.44 1.317±0.49 8.355±1.33 0.358±0.18 6.943±2.42 2.124±0.64 2.645±1.76
ENSMUSG00000050917 ENSMUST00000060336 N/A N/A N/A 0.005±0.00 0.067±0.05 0.058±0.05 N/A 0.024±0.00 N/A 0.014±0.00 0.028±0.02 N/A N/A N/A
ENSMUSG00000070348 ENSMUST00000093962 26.693±9.70 93.122±2.94 44.934±3.37 14.767±7.72 31.387±15.35 49.600±1.28 12.495±3.16 79.215±4.38 22.897±10.24 82.638±18.27 1.636±0.28 34.934±16.51 5.699±2.65 3.519±1.08
ENSMUST00000135985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096999 ENSMUST00000180930 0.020±0.01 0.071±0.05 N/A 1.032±0.00 N/A 0.028±0.01 N/A 0.017±0.01 0.009±0.01 N/A N/A N/A N/A 0.032±0.01

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