C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149792 MRPL49 9606 + 11:65122183-65127371 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279242 MRPL49-001 65122328-65127371 protein_coding
  ENST00000524482 MRPL49-002 65122183-65127356 processed_transcript
  ENST00000526171 MRPL49-006 65122321-65125733 protein_coding
  ENST00000526319 MRPL49-004 65122319-65127363 nonsense_mediated_decay
  ENST00000528529 MRPL49-007 65122291-65126302 processed_transcript
  ENST00000531705 MRPL49-009 65122336-65127250 protein_coding
  ENST00000532671 MRPL49-003 65124725-65127363 retained_intron
  ENST00000533943 MRPL49-005 65122355-65126178 protein_coding
  ENST00000534078 MRPL49-008 65122311-65126004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279242ENST00000526319
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279242 20.308±0.00 4.748±0.00 8.779±3.10 12.738±0.00 6.923±0.00 7.280±5.70 24.431±0.00 22.317±0.00 5.361±0.00 13.652±0.00 17.378±9.53 34.154±17.29 12.325±2.61
ENST00000526319 N/A N/A N/A N/A N/A 1.905±0.00 13.022±6.80 6.308±0.00 N/A N/A 5.114±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MM CIL_0002MM_0001 CGP 11:65121780-65134533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005761 IDA mitochondrial ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075422 BX248510.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000007338 Mrpl49 mitochondrial ribosomal protein L49 protein_coding Mus_musculus

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