C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000279242 MRPL49-001 ENSG00000149792 9606 + 11:65122328-65127371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279242
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279242 20.308±0.00 4.748±0.00 8.779±3.10 12.738±0.00 6.923±0.00 7.280±5.70 24.431±0.00 22.317±0.00 5.361±0.00 13.652±0.00 17.378±9.53 34.154±17.29 12.325±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MM CIL_0002MM_0001 CGP 11:65121780-65134533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005761 IDA mitochondrial ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025723 Syvn1-004 protein_coding Mus_musculus 2e-32 145
ENSMUST00000134667 Syvn1-002 protein_coding Mus_musculus 2e-32 145
ENSMUST00000142101 Syvn1-003 retained_intron Mus_musculus 2e-32 145
ENSMUST00000156550 Syvn1-005 protein_coding Mus_musculus 2e-32 145
ENSMUST00000138532 Syvn1-001 protein_coding Mus_musculus 2e-32 145
ENSMUST00000007482 Mrpl49-201 protein_coding Mus_musculus 1e-29 135

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