C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149972 CNTN5 9606 + 11:99020953-100358885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279463 CNTN5-201 99819532-100358885 protein_coding
  ENST00000418526 CNTN5-004 99556139-100356742 protein_coding
  ENST00000524560 CNTN5-005 100191177-100356289 processed_transcript
  ENST00000524871 CNTN5-001 99021190-100358885 protein_coding
  ENST00000525047 CNTN5-007 99020953-99049844 processed_transcript
  ENST00000525236 CNTN5-009 99956806-100003968 processed_transcript
  ENST00000527185 CNTN5-003 99021141-100309702 protein_coding
  ENST00000527682 CNTN5-010 100070401-100074406 retained_intron
  ENST00000528682 CNTN5-006 99021190-100356566 protein_coding
  ENST00000528727 CNTN5-002 99020976-100225447 retained_intron
  ENST00000530458 CNTN5-008 99556146-99558334 protein_coding
  ENST00000619298 CNTN5-202 99844808-100358885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279463ENST00000524560ENST00000524871ENST00000525047ENST00000527185ENST00000527682ENST00000528682ENST00000528727ENST00000619298
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279463 N/A N/A 1.643±0.00 N/A N/A 0.046±0.00 N/A N/A N/A N/A 0.159±0.00 0.104±0.00
ENST00000524560 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A 0.155±0.00 0.448±0.00 0.185±0.01
ENST00000524871 N/A N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A
ENST00000525047 0.098±0.00 N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A 0.072±0.00 N/A N/A
ENST00000527185 N/A N/A N/A N/A 0.010±0.00 0.017±0.00 0.052±0.00 N/A N/A N/A N/A N/A
ENST00000527682 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A 0.131±0.00
ENST00000528682 N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A
ENST00000528727 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A
ENST00000619298 0.017±0.00 0.057±0.00 0.860±0.00 0.024±0.00 0.005±0.00 N/A 0.029±0.00 0.230±0.00 N/A 0.061±0.02 0.217±0.12 0.031±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007605 IEA sensory perception of sound
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021584 cntn5 contactin 5 protein_coding Danio_rerio
ENSMUSG00000039488 Cntn5 contactin 5 protein_coding Mus_musculus

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