C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 177, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151327 FAM177A1 9606 + 14:35044907-35113130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000280987 FAM177A1-001 35046403-35083383 protein_coding
  ENST00000382406 FAM177A1-010 35046378-35081387 protein_coding
  ENST00000396472 FAM177A1-201 35044907-35083381 protein_coding
  ENST00000553852 FAM177A1-004 35046593-35053431 nonsense_mediated_decay
  ENST00000553901 FAM177A1-009 35099676-35110726 retained_intron
  ENST00000553955 FAM177A1-005 35046681-35079012 nonsense_mediated_decay
  ENST00000554052 FAM177A1-003 35046453-35050396 protein_coding
  ENST00000554794 FAM177A1-007 35053200-35081103 protein_coding
  ENST00000555211 FAM177A1-002 35045117-35053408 protein_coding
  ENST00000555260 FAM177A1-008 35081081-35113130 nonsense_mediated_decay
  ENST00000556858 FAM177A1-006 35046604-35054991 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000280987ENST00000382406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000280987 14.151±0.00 13.952±0.00 3.928±0.00 13.781±4.65 9.462±1.32 10.183±3.25 7.738±5.28 18.146±0.00 8.729±2.41 20.039±0.00 12.525±2.18 10.243±0.00 N/A
ENST00000382406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 130.969±0.00 50.436±0.00 168.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045L CIL_00045L_0001 CGP 14:34981957-35113130
CIL_00045K CIL_00045K_0001 CGP 14:35044907-35122517

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067908 FAM177A1 (1 of 2) family with sequence similarity 177, member A1 protein_coding Danio_rerio
ENSDARG00000079636 fam177a1 family with sequence similarity 177, member A1 protein_coding Danio_rerio
ENSMUSG00000094103 1700047I17Rik2 RIKEN cDNA 1700047I17 gene 2 protein_coding Mus_musculus
ENSMUSG00000095595 Fam177a family with sequence similarity 177, member A protein_coding Mus_musculus

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