C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: schwannomin interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151967 SCHIP1 9606 + 3:159839861-159897360 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000445224 SCHIP1-004 159839861-159897360 protein_coding
  ENST00000461058 SCHIP1-011 159839938-159886376 retained_intron
  ENST00000472483 SCHIP1-014 159840099-159888119 retained_intron
  ENST00000475932 SCHIP1-015 159888792-159892157 retained_intron
  ENST00000482804 SCHIP1-005 159852939-159897349 protein_coding
  ENST00000482885 SCHIP1-006 159852992-159894723 retained_intron
  ENST00000483730 SCHIP1-013 159840060-159846052 processed_transcript
  ENST00000495954 SCHIP1-012 159839940-159897234 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000445224ENST00000475932ENST00000482804ENST00000482885
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000445224 N/A N/A 49.708±32.63 N/A 5.600±0.00 N/A N/A N/A 19.208±0.00 0.476±0.00 N/A 1.785±0.00
ENST00000475932 N/A N/A 252.484±0.00 N/A N/A N/A 5.504±0.00 40.433±0.00 79.487±0.00 N/A N/A N/A
ENST00000482804 1.326±0.00 N/A N/A 1.991±0.00 N/A 16.576±9.66 1.200±0.00 N/A 16.055±9.75 0.405±0.13 3.319±1.10 1.658±0.00
ENST00000482885 0.201±0.00 0.213±0.00 N/A 0.182±0.00 0.120±0.00 N/A 0.130±0.00 0.584±0.00 N/A 0.116±0.04 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JS CIL_0004JS_0002 CGP 3:158962928-159897360

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035175 schip1 schwannomin interacting protein 1 protein_coding Danio_rerio

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